Basic Information
Locus ID:
AH08.1732
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 34322067 | 34337603 | + | AH08.1732 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.81 | 198,663.55 Da | 52.72 | 74.46 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 387 | 660 | 1.56415E-138 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1496 | 1759 | 3.17598E-146 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 407 | 656 | 2.3E-34 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1535 | 1701 | 1.5E-32 | IPR002498 |
| Pfam | PF01363 | FYVE zinc finger | 55 | 120 | 2.0E-16 | IPR000306 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1495 | 1759 | 1.57E-77 | - |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 53 | 123 | 1.53E-18 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 454 | 626 | 1.05E-42 | IPR027409 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1479 | 1616 | 3.2E-34 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1619 | 1760 | 2.4E-41 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 453 | 626 | 8.7E-55 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 46 | 132 | 1.3E-20 | IPR013083 |
| SMART | SM00330 | PIPK_2 | 1462 | 1760 | 1.5E-120 | IPR002498 |
| SMART | SM00064 | fyve_4 | 50 | 123 | 1.5E-19 | IPR000306 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1433 | 1759 | 56.292595 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 58 | 122 | 12.934279 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1248 | 1291 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 127 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 159 | - | - |
| Coils | Coil | Coil | 1230 | 1250 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_004973590.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Setaria italica] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | K3YFU8 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Setaria italica OX=4555 GN=101766004 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology