Basic Information
Locus ID:
AH08.1701
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 33941879 | 33948926 | - | AH08.1701 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.98 | 85,726.37 Da | 48.48 | 86.20 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 329 | 599 | 8.8E-44 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 69 | 9.0E-13 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 180 | 8.8E-10 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 310 | 600 | 1.08E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 192 | 1.74E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 403 | 618 | 1.1E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 211 | 1.4E-52 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 301 | 402 | 4.6E-33 | - |
| SMART | SM00220 | serkin_6 | 326 | 599 | 6.7E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 326 | 609 | 35.127949 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 332 | 354 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 445 | 457 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 691 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 664 | 678 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 737 | 806 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 742 | 768 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.1 | Leucine-rich repeat protein kinase family protein. | 3.21E-203 |
| RefSeq | XP_004973571.2 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Setaria italica] | 0 |
| Q0WVM4 | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1 | 3.09E-202 | |
| TrEMBL | K3YGK3 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101757092 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology