Basic Information
Locus ID:
AH08.153
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 1547120 | 1550362 | + | AH08.153 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 72,956.01 Da | 37.15 | 93.09 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 423 | 685 | 2.92031E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 73 | 3.3E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 173 | 232 | 2.8E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 422 | 685 | 5.7E-35 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 243 | 9.45E-44 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 398 | 685 | 1.04E-52 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 258 | 1.9E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 496 | 689 | 1.5E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 146 | 1.2E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 495 | 2.9E-25 | - |
| SMART | SM00369 | LRR_typ_2 | 147 | 171 | 7.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 195 | 219 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 99 | 123 | 34.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 417 | 689 | 27.368383 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 301 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45340.1 | Leucine-rich repeat protein kinase family protein. | 3.14E-164 |
| RefSeq | XP_025821391.1 | probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Panicum hallii] | 0 |
| C0LGN2 | Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana OX=3702 GN=LRR-RLK PE=1 SV=1 | 1.93E-45 | |
| TrEMBL | A0A2T7D2V3 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_6G015900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology