Basic Information
Locus ID:
AH08.1450
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 30096774 | 30117599 | - | AH08.1450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.79 | 337,790.63 Da | 52.12 | 77.06 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 2539 | 2572 | 2.26897E-8 | - |
| CDD | cd14066 | STKc_IRAK | 2669 | 2933 | 2.46759E-87 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 2666 | 2930 | 1.5E-43 | IPR001245 |
| Pfam | PF02992 | Transposase family tnp2 | 293 | 437 | 1.8E-49 | IPR004242 |
| Pfam | PF13963 | Transposase-associated domain | 5 | 78 | 1.5E-16 | IPR029480 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 621 | 727 | 4.4E-36 | IPR025452 |
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 881 | 946 | 1.4E-13 | IPR025312 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2647 | 2930 | 1.35E-74 | IPR011009 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 2019 | 2120 | 5.69E-7 | IPR038765 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 2402 | 2574 | 1.19E-6 | IPR009030 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2739 | 2954 | 3.8E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2625 | 2738 | 3.6E-29 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 2494 | 2581 | 5.0E-11 | - |
| SMART | SM00220 | serkin_6 | 2663 | 2935 | 4.9E-36 | IPR000719 |
| SMART | SM00181 | egf_5 | 2542 | 2581 | 0.88 | IPR000742 |
| SMART | SM00181 | egf_5 | 2495 | 2538 | 3.9 | IPR000742 |
| SMART | SM00179 | egfca_6 | 2539 | 2581 | 2.6E-5 | IPR001881 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 2539 | 2576 | 9.248213 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 2663 | 2931 | 37.700336 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 2783 | 2795 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 2669 | 2692 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1068 | 1103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 948 | 978 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2266 | 2300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1783 | 1815 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2279 | 2300 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1834 | 1882 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1261 | 1293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1024 | 1103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1621 | 1649 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1782 | 1883 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1047 | 1067 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1261 | 1285 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1621 | 1654 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1913 | 1945 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1027 | 1046 | - | - |
| Coils | Coil | Coil | 2089 | 2109 | - | - |
| Coils | Coil | Coil | 1572 | 1606 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.1 | wall associated kinase 3. encodes a wall-associated kinase | 3.59E-119 |
| RefSeq | XP_039778865.1 | uncharacterized protein LOC120646298 [Panicum virgatum] | 0 |
| Q9LMN8 | Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2 | 3.47E-118 | |
| TrEMBL | Q2QQL4 | Transposon protein, putative, CACTA, En/Spm sub-class OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g30630 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 46 | AH01.2619, AH01.3243, AH02.2591, AH02.744, AH03.1151 ... |
| Poaceae | Lolium multiflorum | 13 | gene-QYE76_005385, gene-QYE76_005912, gene-QYE76_006405 ... |