Basic Information
Locus ID:
AH08.1177
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH08 | 23246857 | 23250226 | - | AH08.1177 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 81,130.34 Da | 39.03 | 86.21 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 354 | 390 | 1.57073E-6 | - |
| Pfam | PF00069 | Protein kinase domain | 465 | 729 | 2.7E-45 | IPR000719 |
| Pfam | PF07645 | Calcium-binding EGF domain | 354 | 390 | 6.3E-7 | IPR001881 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 44 | 84 | 1.2E-8 | IPR025287 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 464 | 736 | 2.02E-66 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 353 | 393 | 1.93E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 440 | 537 | 4.1E-21 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 310 | 397 | 4.5E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 538 | 745 | 3.7E-52 | - |
| SMART | SM00220 | serkin_6 | 463 | 732 | 8.4E-35 | IPR000719 |
| SMART | SM00179 | egfca_6 | 354 | 397 | 8.9E-8 | IPR001881 |
| SMART | SM00181 | egf_5 | 357 | 397 | 0.011 | IPR000742 |
| SMART | SM00181 | egf_5 | 299 | 353 | 43.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 463 | 732 | 37.742741 | IPR000719 |
| ProSiteProfiles | PS50026 | EGF-like domain profile. | 354 | 397 | 10.646597 | IPR000742 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 582 | 594 | - | IPR008271 |
| ProSitePatterns | PS00010 | Aspartic acid and asparagine hydroxylation site. | 372 | 383 | - | IPR000152 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 354 | 381 | - | IPR018097 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 469 | 491 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 3.62E-101 |
| RefSeq | XP_039853753.1 | wall-associated receptor kinase 1-like [Panicum virgatum] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 3.51E-100 | |
| TrEMBL | A0A8T0RDN4 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG139100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology