HalophFGD

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Basic Information
Locus ID: AH08.1154
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: metal ion binding
Maps and Mapping Data
Chromosome Start End Strand ID
AH08 22536581 22544376 + AH08.1154
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.05 76,281.92 Da 57.58 71.33 -0.49
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 169 196 - -
MobiDBLite mobidb-lite consensus disorder prediction 630 669 - -
MobiDBLite mobidb-lite consensus disorder prediction 59 97 - -
MobiDBLite mobidb-lite consensus disorder prediction 64 94 - -
MobiDBLite mobidb-lite consensus disorder prediction 647 661 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039853740.1 uncharacterized protein LOC120712091 isoform X4 [Panicum virgatum] 1.49E-22
TrEMBL A0A3L6RMA3 DNMT1-RFD domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM13G10080 PE=4 SV=1 4.18E-21
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 7 AH01.2485, AH01.4037, AH07.1414, AH08.1154, BH02.2978 ...
CH06.746, CH08.1241
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.