Basic Information
Locus ID:
AH07.892
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
phosphatase 2A 55 kDa regulatory subunit B'
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 9294991 | 9312000 | - | AH07.892 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.98 | 99,860.59 Da | 51.42 | 79.26 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 596 | 632 | 0.25 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 411 | 887 | 2.14E-33 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 441 | 893 | 2.4E-27 | IPR015943 |
| SMART | SM00320 | WD40_4 | 476 | 516 | 23.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 403 | 438 | 7.2 | IPR001680 |
| SMART | SM00320 | WD40_4 | 744 | 798 | 450.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 643 | 683 | 5.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 593 | 632 | 0.79 | IPR001680 |
| SMART | SM00320 | WD40_4 | 702 | 740 | 320.0 | IPR001680 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 476 | 490 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 689 | 716 | 4.5E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 463 | 491 | 4.5E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 417 | 437 | 4.5E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 745 | 770 | 4.5E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 717 | 744 | 4.5E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 771 | 797 | 4.5E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 632 | 659 | 4.5E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 864 | 893 | 4.5E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 604 | 631 | 4.5E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 492 | 520 | 4.5E-156 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 660 | 688 | 4.5E-156 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 290 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 323 | 388 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 260 | 302 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 348 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.1 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 8.35E-274 |
| RefSeq | XP_004951407.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform [Setaria italica] | 0 |
| A2X2K3 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Oryza sativa subsp. indica OX=39946 GN=OsI_006296 PE=2 SV=2 | 1.1699998203105E-317 | |
| TrEMBL | K3YQW1 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Setaria italica OX=4555 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology