Basic Information
Locus ID:
AH07.834
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Transducin family protein WD-40 repeat family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 8469990 | 8470499 | - | AH07.834 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.97 | 18,710.07 Da | 75.99 | 67.22 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 27 | 96 | 7.32E-11 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 15 | 117 | 4.3E-11 | IPR015943 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 63 | 93 | 8.503359 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 95 | 169 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24530.1 | Transducin/WD40 repeat-like superfamily protein. | 4.75E-15 |
| RefSeq | XP_042969234.1 | protein JINGUBANG-like [Carya illinoinensis] | 1.58E-22 |
| TrEMBL | A0A835KJR5 | WD_REPEATS_REGION domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_014935 PE=4 SV=1 | 1.48E-23 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||