Basic Information
Locus ID:
AH07.700
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 6806759 | 6813192 | + | AH07.700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.65 | 91,714.90 Da | 51.06 | 89.49 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 434 | 649 | 4.1E-30 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 97 | 112 | 0.23 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 178 | 4.6E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 64 | 245 | 3.64E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 409 | 709 | 8.99E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 511 | 736 | 9.9E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 394 | 510 | 1.5E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 261 | 1.6E-45 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 433 | 714 | 28.682846 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 439 | 461 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 294 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 1.38E-106 |
| RefSeq | XP_025794912.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like [Panicum hallii] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 1.34E-105 | |
| TrEMBL | A0A2S3GMJ0 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G071800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology