Basic Information
Locus ID:
AH07.694
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 6760692 | 6762115 | - | AH07.694 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.01 | 41,827.98 Da | 47.82 | 103.83 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 17 | 53 | 1.7E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 12 | 64 | 1.11E-9 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 74 | 245 | 2.2E-8 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 106 | 3.1E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 110 | 317 | 1.8E-6 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 13 | 50 | 10.239312 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60400.1 | F-box/RNI-like superfamily protein. | 1.01E-13 |
| RefSeq | XP_039788567.1 | FBD-associated F-box protein At5g56370-like [Panicum virgatum] | 1.35E-132 |
| Q1PFI4 | F-box protein At1g60400 OS=Arabidopsis thaliana OX=3702 GN=At1g60400 PE=2 SV=2 | 1.01E-12 | |
| TrEMBL | A0A1E5WLS7 | F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0000687 PE=4 SV=1 | 8.83E-147 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology