Basic Information
Locus ID:
AH07.472
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 4806313 | 4807417 | - | AH07.472 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 35,779.31 Da | 68.56 | 44.48 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 281 | 334 | 2.05E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 289 | 341 | 3.8E-6 | IPR013083 |
| SMART | SM00184 | ring_2 | 291 | 328 | 2.8E-4 | IPR001841 |
| SMART | SM00184 | ring_2 | 8 | 121 | 14.0 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 291 | 328 | 9.435407 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 59 | 78 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039849991.1 | E3 ubiquitin-protein ligase WAV3-like [Panicum virgatum] | 1.52E-13 |
| TrEMBL | A0A8T0SYK3 | Zinc finger (C3HC4-type RING finger) family protein OS=Panicum virgatum OX=38727 GN=PVAP13_5KG534400 PE=4 SV=1 | 1.2E-11 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||