HalophFGD

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Basic Information
Locus ID: AH07.4052
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: EF-hand domain
Maps and Mapping Data
Chromosome Start End Strand ID
AH07 57438759 57440471 + AH07.4052
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.30 63,026.18 Da 51.47 80.14 -0.38
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd15898 EFh_PI-PLC 426 556 2.81486E-17 -
CDD cd00051 EFh 426 485 1.37552E-18 IPR002048
CDD cd05117 STKc_CAMK 109 377 6.76369E-128 -
Pfam PF00069 Protein kinase domain 109 378 3.6E-68 IPR000719
Pfam PF13499 EF-hand domain pair 426 486 2.6E-14 IPR002048
Pfam PF13499 EF-hand domain pair 496 557 1.3E-13 IPR002048
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 97 405 2.29E-80 IPR011009
SUPERFAMILY SSF47473 EF-hand 402 559 1.1E-46 IPR011992
Gene3D G3DSA:1.10.238.10 - 388 559 4.0E-60 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 195 387 3.5E-54 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 111 194 1.2E-24 -
SMART SM00054 efh_1 461 489 1.5E-4 IPR002048
SMART SM00054 efh_1 531 559 1.9E-6 IPR002048
SMART SM00220 serkin_6 109 378 8.1E-91 IPR000719
SMART SM00054 efh_1 497 525 0.0024 IPR002048
SMART SM00054 efh_1 425 453 6.2E-6 IPR002048
ProSiteProfiles PS51257 Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 5.0 -
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 421 456 16.103443 IPR002048
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 529 562 11.974924 IPR002048
ProSiteProfiles PS50011 Protein kinase domain profile. 109 378 45.643646 IPR000719
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 493 528 14.569197 IPR002048
ProSiteProfiles PS50222 EF-hand calcium-binding domain profile. 457 492 12.225983 IPR002048
ProSitePatterns PS00018 EF-hand calcium-binding domain. 470 482 - IPR018247
ProSitePatterns PS00018 EF-hand calcium-binding domain. 434 446 - IPR018247
ProSitePatterns PS00018 EF-hand calcium-binding domain. 540 552 - IPR018247
ProSitePatterns PS00018 EF-hand calcium-binding domain. 506 518 - IPR018247
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 115 142 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 229 241 - IPR008271
MobiDBLite mobidb-lite consensus disorder prediction 43 93 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005509 (calcium ion binding) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K13412 (calcium-dependent protein kinase [EC:2.7.11.1])
Pathway:
ko04626 (Plant-pathogen interaction) map04626 (Plant-pathogen interaction)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G17290.1 Calcium-dependent protein kinase family protein. Encodes calcium dependent protein kinase 6 (CPK6), a member of the Arabidopsis CDPK gene family. CDPKs contain an intrinsic Ca2+-activation domain with four EF hand Ca2+-binding sites. CDPKs protein kinases have been proposed to function in multiple plant signal transduction pathways downstream of [Ca2+]cyt elevations, thus transducing various physiological responses. CPK6 is expressed in both guard cells and mesophyll cells. Functions in guard cell ion channel regulation. ABA and Ca(2+) activation of slow-type anion channels and, interestingly, ABA activation of plasma membrane Ca(2+)-permeable channels were impaired in independent alleles of single and double cpk3cpk6 mutant guard cells. Furthermore, ABA- and Ca(2+)-induced stomatal closing were partially impaired in these cpk3cpk6 mutant alleles. CPK3 is also a member of the Arabidopsis CDPK family. 1.91E-226
RefSeq XP_039779800.1 calcium-dependent protein kinase 6-like [Panicum virgatum] 1.44E-266
Swiss-Prot Q6K968 Calcium-dependent protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK6 PE=2 SV=1 2.4E-250
TrEMBL A0A1E5V9V8 Calcium-dependent protein kinase 4 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017191 PE=4 SV=1 1.41E-265
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 21 jg11725, jg14382, jg15176, jg16355, jg16917, jg19366, jg3681 ...
jg20425, jg21514, jg21886, jg23000, jg23516, jg26104, jg31889, jg31897, jg37691, jg38607, jg39387, jg4759, jg6506, jg8517
Aizoaceae Mesembryanthemum crystallinum 11 gene_100, gene_10179, gene_10344, gene_12265, gene_14694 ...
gene_15273, gene_1547, gene_21794, gene_2331, gene_8423, gene_9788
Amaranthaceae Atriplex hortensis 11 Ah002919, Ah003065, Ah004531, Ah005084, Ah005588, Ah006573 ...
Ah008733, Ah009843, Ah017529, Ah022667, Ah036100
Amaranthaceae Beta vulgaris 9 BVRB_1g001080, BVRB_4g073820, BVRB_4g077520, BVRB_4g088370 ...
BVRB_5g099670, BVRB_5g108920, BVRB_5g109120, BVRB_8g186280, BVRB_9g215750
Amaranthaceae Salicornia bigelovii 22 Sbi_jg11219, Sbi_jg15794, Sbi_jg15820, Sbi_jg17311 ...
Sbi_jg17776, Sbi_jg18146, Sbi_jg23958, Sbi_jg29447, Sbi_jg305, Sbi_jg36207, Sbi_jg36473, Sbi_jg3690, Sbi_jg39982, Sbi_jg40146, Sbi_jg46194, Sbi_jg50065, Sbi_jg55312, Sbi_jg56578, Sbi_jg56618, Sbi_jg61948, Sbi_jg62434, Sbi_jg7790
Amaranthaceae Salicornia europaea 11 Seu_jg1010, Seu_jg12239, Seu_jg13797, Seu_jg13821, Seu_jg569 ...
Seu_jg14353, Seu_jg1713, Seu_jg20521, Seu_jg4315, Seu_jg4493, Seu_jg6284
Amaranthaceae Suaeda aralocaspica 13 GOSA_00000764, GOSA_00001116, GOSA_00001875, GOSA_00005434 ...
GOSA_00006690, GOSA_00006691, GOSA_00007222, GOSA_00011320, GOSA_00012122, GOSA_00014108, GOSA_00015474, GOSA_00022157, GOSA_00029161
Amaranthaceae Suaeda glauca 24 Sgl08738, Sgl10326, Sgl10704, Sgl12139, Sgl15494, Sgl16039 ...
Sgl16060, Sgl17427, Sgl23359, Sgl25358, Sgl28473, Sgl30534, Sgl46313, Sgl51027, Sgl51348, Sgl52606, Sgl52607, Sgl56333, Sgl56595, Sgl57897, Sgl61842, Sgl62129, Sgl66693, Sgl83114
Amaranthaceae Chenopodium album 29 gene:ENSEOMG00000007021, gene:ENSEOMG00000008253 ...
gene:ENSEOMG00000009477, gene:ENSEOMG00000010691, gene:ENSEOMG00000011840, gene:ENSEOMG00000012347, gene:ENSEOMG00000016169, gene:ENSEOMG00000016706, gene:ENSEOMG00000019910, gene:ENSEOMG00000020916, gene:ENSEOMG00000022750, gene:ENSEOMG00000024107, gene:ENSEOMG00000024890, gene:ENSEOMG00000024900, gene:ENSEOMG00000026889, gene:ENSEOMG00000028558, gene:ENSEOMG00000028656, gene:ENSEOMG00000029542, gene:ENSEOMG00000033761, gene:ENSEOMG00000035728, gene:ENSEOMG00000038182, gene:ENSEOMG00000040445, gene:ENSEOMG00000040821, gene:ENSEOMG00000042303, gene:ENSEOMG00000044177, gene:ENSEOMG00000047720, gene:ENSEOMG00000047969, gene:ENSEOMG00000049203, gene:ENSEOMG00000050061
Amaranthaceae Chenopodium quinoa 17 CQ.Regalona.r1.1AG0004350, CQ.Regalona.r1.1AG0021850 ...
CQ.Regalona.r1.1BG0002540, CQ.Regalona.r1.2BG0027870, CQ.Regalona.r1.4AG0006690, CQ.Regalona.r1.4AG0013170, CQ.Regalona.r1.4AG0022590, CQ.Regalona.r1.4BG0002380, CQ.Regalona.r1.4BG0015470, CQ.Regalona.r1.4BG0023850, CQ.Regalona.r1.5AG0006580, CQ.Regalona.r1.5BG0006820, CQ.Regalona.r1.5BG0012200, CQ.Regalona.r1.7BG0004420, CQ.Regalona.r1.8AG0001790, CQ.Regalona.r1.8BG0001700, CQ.Regalona.r1.9AG0020230
Anacardiaceae Pistacia vera 14 pistato.v30036180, pistato.v30048940, pistato.v30050590 ...
pistato.v30069430, pistato.v30108310, pistato.v30135190, pistato.v30156640, pistato.v30158300, pistato.v30169190, pistato.v30202940, pistato.v30276900, pistato.v30277030, pistato.v30277100, pistato.v30286800
Apiaceae Apium graveolens 18 Ag10G00470, Ag10G02901, Ag11G04490, Ag11G05037, Ag1G01019 ...
Ag2G00788, Ag2G01602, Ag3G00683, Ag3G00690, Ag4G01847, Ag4G01925, Ag5G01315, Ag5G02682, Ag6G01692, Ag7G00598, Ag7G02349, Ag9G00969, Ag9G01477
Arecaceae Cocos nucifera 13 COCNU_06G003440, COCNU_06G011870, COCNU_09G005690 ...
COCNU_12G005140, COCNU_14G001940, COCNU_14G007810, COCNU_15G002380, scaffold001753G000020, scaffold003239G000020, scaffold006962G000030, scaffold010979G000020, scaffold017406G000010, scaffold036482G000010
Arecaceae Phoenix dactylifera 17 gene-LOC103695544, gene-LOC103698021, gene-LOC103701286 ...
gene-LOC103704957, gene-LOC103705099, gene-LOC103706309, gene-LOC103709017, gene-LOC103713516, gene-LOC103714529, gene-LOC103716002, gene-LOC103716834, gene-LOC103717626, gene-LOC103717884, gene-LOC103719110, gene-LOC103721833, gene-LOC103723419, gene-LOC120108401
Asparagaceae Asparagus officinalis 16 AsparagusV1_01.1035.V1.1, AsparagusV1_01.1895.V1.1 ...
AsparagusV1_01.3361.V1.1, AsparagusV1_01.391.V1.1, AsparagusV1_02.1983.V1.1, AsparagusV1_02.710.V1.1, AsparagusV1_03.1251.V1.1, AsparagusV1_03.423.V1.1, AsparagusV1_03.429.V1.1, AsparagusV1_04.2188.V1.1, AsparagusV1_05.1643.V1.1, AsparagusV1_05.1660.V1.1, AsparagusV1_07.2340.V1.1, AsparagusV1_09.991.V1.1, AsparagusV1_10.1797.V1.1, AsparagusV1_Unassigned.410.V1.1
Asteraceae Flaveria trinervia 25 Ftri11G27024, Ftri12G31052, Ftri12G33476, Ftri12G33979 ...
Ftri13G32777, Ftri14G04984, Ftri15G31545, Ftri16G16401, Ftri16G21344, Ftri17G10673, Ftri17G29397, Ftri18G07727, Ftri18G12285, Ftri18G13008, Ftri18G24497, Ftri1G21438, Ftri2G04406, Ftri2G30124, Ftri4G09160, Ftri5G03887, Ftri5G20163, Ftri6G10402, Ftri6G17467, Ftri7G08597, Ftri8G19970
Brassicaceae Arabidopsis thaliana 20 AT1G35670.1, AT1G50700.1, AT1G61950.1, AT1G76040.2 ...
AT2G17290.1, AT2G38910.1, AT3G10660.1, AT3G20410.1, AT4G04710.1, AT4G04720.1, AT4G04740.2, AT4G09570.1, AT4G21940.2, AT4G23650.1, AT4G35310.1, AT4G38230.2, AT5G04870.1, AT5G12180.1, AT5G19360.1, AT5G23580.1
Brassicaceae Eutrema salsugineum 20 Thhalv10001816m.g.v1.0, Thhalv10004083m.g.v1.0 ...
Thhalv10012990m.g.v1.0, Thhalv10013236m.g.v1.0, Thhalv10013240m.g.v1.0, Thhalv10017647m.g.v1.0, Thhalv10018359m.g.v1.0, Thhalv10019860m.g.v1.0, Thhalv10020268m.g.v1.0, Thhalv10020475m.g.v1.0, Thhalv10022628m.g.v1.0, Thhalv10023804m.g.v1.0, Thhalv10024803m.g.v1.0, Thhalv10024899m.g.v1.0, Thhalv10025058m.g.v1.0, Thhalv10026767m.g.v1.0, Thhalv10027200m.g.v1.0, Thhalv10028567m.g.v1.0, Thhalv10028598m.g.v1.0, Thhalv10028617m.g.v1.0
Brassicaceae Schrenkiella parvula 18 Sp1g37540.v2.2, Sp2g02620.v2.2, Sp2g23610.v2.2 ...
Sp3g08980.v2.2, Sp3g18420.v2.2, Sp3g30640.v2.2, Sp4g21290.v2.2, Sp5g31150.v2.2, Sp6g04200.v2.2, Sp6g08040.v2.2, Sp6g25050.v2.2, Sp6g31460.v2.2, Sp6g37950.v2.2, Sp7g20130.v2.2, Sp7g21580.v2.2, Sp7g33110.v2.2, Sp7g37500.v2.2, SpUn0654_0010.v2.2
Brassicaceae Brassica nigra 30 BniB01g006110.2N, BniB01g006950.2N, BniB01g054380.2N ...
BniB02g013560.2N, BniB02g043330.2N, BniB02g049940.2N, BniB02g055770.2N, BniB02g059140.2N, BniB02g080650.2N, BniB02g087460.2N, BniB03g036430.2N, BniB03g065050.2N, BniB04g026370.2N, BniB05g000900.2N, BniB05g003060.2N, BniB05g013520.2N, BniB05g015130.2N, BniB05g025480.2N, BniB05g044320.2N, BniB05g056000.2N, BniB06g030590.2N, BniB07g024900.2N, BniB07g031370.2N, BniB07g040620.2N, BniB07g050590.2N, BniB08g001880.2N, BniB08g005720.2N, BniB08g024960.2N, BniB08g035430.2N, BniB08g047630.2N
Casuarinaceae Casuarina equisetifolia 10 Ceq01G1306, Ceq03G0247, Ceq03G0830, Ceq03G1015, Ceq04G1244 ...
Ceq04G1254, Ceq05G1605, Ceq07G1797, Ceq07G1799, Ceq08G1618
Casuarinaceae Casuarina glauca 10 Cgl01G1461, Cgl03G0292, Cgl03G0904, Cgl03G1100, Cgl04G1406 ...
Cgl04G1415, Cgl05G1601, Cgl07G1954, Cgl07G1956, Cgl08G1657
Cymodoceaceae Cymodocea nodosa 16 gene.Cymno01g00100, gene.Cymno01g12280, gene.Cymno02g10820 ...
gene.Cymno03g04590, gene.Cymno04g13190, gene.Cymno05g14330, gene.Cymno07g01460, gene.Cymno07g09040, gene.Cymno08g07620, gene.Cymno10g08430, gene.Cymno13g01160, gene.Cymno14g07400, gene.Cymno15g00760, gene.Cymno16g02260, gene.Cymno17g05540, gene.Cymno18g01710
Dunaliellaceae Dunaliella salina 6 Dusal.0190s00005.v1.0, Dusal.0206s00016.v1.0 ...
Dusal.0224s00021.v1.0, Dusal.0272s00004.v1.0, Dusal.0933s00003.v1.0, Dusal.1941s00001.v1.0
Hydrocharitaceae Thalassia testudinum 15 gene.Thate01g09490, gene.Thate02g02970, gene.Thate02g03040 ...
gene.Thate02g13120, gene.Thate02g39750, gene.Thate04g03190, gene.Thate05g13720, gene.Thate05g22480, gene.Thate06g09940, gene.Thate07g01440, gene.Thate07g10440, gene.Thate08g03330, gene.Thate08g10240, gene.Thate09g04200, gene.Thate09g15430
Malvaceae Hibiscus hamabo Siebold & Zucc. 12 nbisL1-mrna-11227, nbisL1-mrna-1384, nbisL1-mrna-1855 ...
nbisL1-mrna-3875, nbisL1-mrna-399, nbisL1-mrna-4074, nbisL1-mrna-5129, nbisL1-mrna-6020, nbisL1-mrna-6022, nbisL1-mrna-7286, nbisL1-mrna-9099, nbisL1-mrna-9216
Nitrariaceae Nitraria sibirica 10 evm.TU.LG01.1777, evm.TU.LG01.1876, evm.TU.LG02.2535 ...
evm.TU.LG05.1871, evm.TU.LG06.1416, evm.TU.LG06.160, evm.TU.LG08.439, evm.TU.LG09.119, evm.TU.LG10.1475, evm.TU.LG12.1123
Plantaginaceae Plantago ovata 14 Pov_00003625, Pov_00003644, Pov_00004388, Pov_00005282 ...
Pov_00005913, Pov_00007036, Pov_00017184, Pov_00020785, Pov_00022903, Pov_00024401, Pov_00036975, Pov_00037673, Pov_00039038, Pov_00040137
Plumbaginaceae Limonium bicolor 20 Lb1G05693, Lb1G06451, Lb2G11169, Lb2G11272, Lb2G12214 ...
Lb2G14691, Lb3G15940, Lb3G17843, Lb3G20062, Lb4G21684, Lb4G22051, Lb4G22053, Lb4G25826, Lb5G27607, Lb5G28136, Lb5G28162, Lb5G28164, Lb5G28166, Lb6G31508, Lb7G33091
Poaceae Echinochloa crus-galli 50 AH01.147, AH01.149, AH01.5169, AH02.2380, AH02.3620 ...
AH03.291, AH03.3159, AH04.423, AH05.121, AH05.1948, AH05.307, AH05.3490, AH07.3031, AH07.4052, AH09.1908, AH09.2076, BH01.5043, BH02.2489, BH02.3335, BH03.3344, BH03.372, BH03.3891, BH03.3894, BH04.198, BH04.455, BH05.141, BH05.2075, BH05.2076, BH05.360, BH07.2855, BH09.2076, BH09.2230, CH01.2627, CH01.454, CH01.457, CH01.5643, CH02.2668, CH02.3898, CH03.3531, CH03.441, CH04.215, CH04.448, CH05.1573, CH05.201, CH05.2149, CH05.3628, CH07.2933, CH07.3933, CH09.2217, CH09.2373
Poaceae Eleusine coracana subsp. coracana 34 gene-QOZ80_1AG0025110, gene-QOZ80_1AG0037140 ...
gene-QOZ80_1BG0075650, gene-QOZ80_1BG0087250, gene-QOZ80_2AG0141240, gene-QOZ80_2AG0151690, gene-QOZ80_2BG0196850, gene-QOZ80_2BG0207070, gene-QOZ80_3AG0213220, gene-QOZ80_3AG0213250, gene-QOZ80_3AG0232180, gene-QOZ80_3BG0258360, gene-QOZ80_3BG0258390, gene-QOZ80_3BG0295760, gene-QOZ80_4AG0306230, gene-QOZ80_4AG0307530, gene-QOZ80_4BG0337210, gene-QOZ80_4BG0338570, gene-QOZ80_5AG0361610, gene-QOZ80_5AG0368640, gene-QOZ80_5AG0383090, gene-QOZ80_5AG0390430, gene-QOZ80_5BG0410010, gene-QOZ80_5BG0416210, gene-QOZ80_5BG0429980, gene-QOZ80_5BG0438070, gene-QOZ80_7AG0556450, gene-QOZ80_7AG0569130, gene-QOZ80_7BG0587370, gene-QOZ80_7BG0600840, gene-QOZ80_9AG0671330, gene-QOZ80_9AG0673660, gene-QOZ80_9BG0694810, gene-QOZ80_9BG0697370
Poaceae Hordeum vulgare 18 HORVU.MOREX.r3.1HG0069650.1, HORVU.MOREX.r3.1HG0092880.1 ...
HORVU.MOREX.r3.2HG0141400.1, HORVU.MOREX.r3.2HG0151360.1, HORVU.MOREX.r3.2HG0188200.1, HORVU.MOREX.r3.2HG0196120.1, HORVU.MOREX.r3.3HG0273330.1, HORVU.MOREX.r3.3HG0295710.1, HORVU.MOREX.r3.4HG0349000.1, HORVU.MOREX.r3.4HG0356730.1, HORVU.MOREX.r3.4HG0410700.1, HORVU.MOREX.r3.5HG0450250.1, HORVU.MOREX.r3.5HG0451470.1, HORVU.MOREX.r3.5HG0462150.1, HORVU.MOREX.r3.5HG0517140.1, HORVU.MOREX.r3.5HG0517190.1, HORVU.MOREX.r3.6HG0604810.1, HORVU.MOREX.r3.6HG0633900.1
Poaceae Lolium multiflorum 17 gene-QYE76_000105, gene-QYE76_002733, gene-QYE76_003401 ...
gene-QYE76_013914, gene-QYE76_015112, gene-QYE76_024533, gene-QYE76_041012, gene-QYE76_042584, gene-QYE76_045491, gene-QYE76_055890, gene-QYE76_059455, gene-QYE76_061395, gene-QYE76_061398, gene-QYE76_064724, gene-QYE76_064780, gene-QYE76_065211, gene-QYE76_071195
Poaceae Oryza coarctata 37 Oco01G014860, Oco01G022770, Oco02G015190, Oco02G023490 ...
Oco03G026300, Oco04G019160, Oco04G026730, Oco05G001720, Oco05G025590, Oco05G025640, Oco06G001700, Oco06G026440, Oco06G026480, Oco07G012990, Oco07G014130, Oco08G012570, Oco08G013630, Oco09G012890, Oco10G013030, Oco10G017870, Oco13G001830, Oco13G008530, Oco14G001940, Oco14G009000, Oco19G009090, Oco20G008950, Oco21G000510, Oco21G002160, Oco22G001320, Oco22G003020, Oco22G009450, Oco23G001290, Oco23G001700, Oco23G002760, Oco23G006580, Oco24G002250, Oco24G006260
Poaceae Oryza sativa 19 LOC_Os01g43410.1, LOC_Os01g59360.1, LOC_Os02g46090.1 ...
LOC_Os02g58520.1, LOC_Os03g03660.1, LOC_Os03g57450.1, LOC_Os03g57510.1, LOC_Os04g47300.1, LOC_Os04g49510.1, LOC_Os05g41270.1, LOC_Os05g50810.1, LOC_Os07g06740.2, LOC_Os07g33110.2, LOC_Os10g39420.1, LOC_Os11g04170.1, LOC_Os11g07040.1, LOC_Os12g03970.1, LOC_Os12g07230.1, LOC_Os12g30150.1
Poaceae Paspalum vaginatum 18 gene-BS78_01G055800, gene-BS78_01G056100 ...
gene-BS78_01G495800, gene-BS78_02G040700, gene-BS78_02G292800, gene-BS78_03G199500, gene-BS78_03G311200, gene-BS78_04G236100, gene-BS78_04G330400, gene-BS78_05G033400, gene-BS78_05G078200, gene-BS78_05G163600, gene-BS78_06G189700, gene-BS78_06G199500, gene-BS78_08G041900, gene-BS78_08G071900, gene-BS78_09G186500, gene-BS78_09G252000
Poaceae Puccinellia tenuiflora 30 Pt_Chr0100525, Pt_Chr0103715, Pt_Chr0103732, Pt_Chr0104160 ...
Pt_Chr0104192, Pt_Chr0105293, Pt_Chr0105298, Pt_Chr0105316, Pt_Chr0105318, Pt_Chr0203770, Pt_Chr0301610, Pt_Chr0301666, Pt_Chr0301673, Pt_Chr0303569, Pt_Chr0304179, Pt_Chr0306599, Pt_Chr0307542, Pt_Chr0502419, Pt_Chr0504422, Pt_Chr0504481, Pt_Chr0505777, Pt_Chr0601773, Pt_Chr0603416, Pt_Chr0603436, Pt_Chr0604858, Pt_Chr0605529, Pt_Chr0702970, Pt_Chr0702974, Pt_Chr0703369, Pt_Chr0703495
Poaceae Sporobolus alterniflorus 53 Chr01G003210, Chr01G017970, Chr01G038360, Chr02G006840 ...
Chr02G014990, Chr03G011350, Chr03G018330, Chr04G005520, Chr04G015250, Chr04G021660, Chr04G023060, Chr04G030210, Chr05G018770, Chr05G026570, Chr06G004910, Chr06G015900, Chr06G023280, Chr06G024790, Chr07G006050, Chr07G020580, Chr07G021730, Chr07G029280, Chr08G011550, Chr09G023260, Chr0G004760, Chr0G005860, Chr0G019960, Chr0G033790, Chr12G001070, Chr12G035100, Chr15G000080, Chr15G006420, Chr16G010170, Chr18G012710, Chr18G016280, Chr19G005680, Chr19G010620, Chr19G012720, Chr22G000270, Chr22G005010, Chr23G005560, Chr23G006650, Chr24G001130, Chr24G008530, Chr26G013980, Chr27G003190, Chr27G005490, Chr27G011620, Chr28G001240, Chr28G007850, Chr30G004510, Chr31G000630, Chr31G001640
Poaceae Thinopyrum elongatum 18 Tel1E01G498800, Tel1E01G712500, Tel2E01G414800 ...
Tel2E01G460400, Tel2E01G696300, Tel2E01G773300, Tel3E01G384800, Tel3E01G533600, Tel4E01G176000, Tel4E01G202800, Tel4E01G529700, Tel5E01G202700, Tel5E01G244900, Tel5E01G668200, Tel5E01G668500, Tel6E01G484400, Tel6E01G786400, Telscf2101G000100
Poaceae Triticum dicoccoides 34 gene_TRIDC1AG045970, gene_TRIDC1AG062430 ...
gene_TRIDC1BG052010, gene_TRIDC1BG071580, gene_TRIDC2AG029830, gene_TRIDC2AG033800, gene_TRIDC2AG058740, gene_TRIDC2AG065100, gene_TRIDC2BG033530, gene_TRIDC2BG038220, gene_TRIDC2BG061760, gene_TRIDC2BG069500, gene_TRIDC3AG033670, gene_TRIDC3AG048090, gene_TRIDC3BG038210, gene_TRIDC3BG054220, gene_TRIDC4AG030020, gene_TRIDC4AG032780, gene_TRIDC4BG017040, gene_TRIDC4BG020540, gene_TRIDC5AG016950, gene_TRIDC5AG023440, gene_TRIDC5AG061700, gene_TRIDC5AG061750, gene_TRIDC5AG069790, gene_TRIDC5BG018720, gene_TRIDC5BG019150, gene_TRIDC5BG024550, gene_TRIDC5BG065760, gene_TRIDC5BG065810, gene_TRIDC6AG040110, gene_TRIDC6AG061550, gene_TRIDC6BG047030, gene_TRIDC6BG068590
Poaceae Triticum aestivum 53 TraesCS1A02G309400.2, TraesCS1A02G424200.1 ...
TraesCS1B02G320400.1, TraesCS1B02G456700.1, TraesCS1D02G308800.1, TraesCS1D02G433400.1, TraesCS2A02G223100.2, TraesCS2A02G248200.3, TraesCS2A02G407200.1, TraesCS2A02G456100.1, TraesCS2B02G248700.2, TraesCS2B02G269200.3, TraesCS2B02G424900.1, TraesCS2B02G478100.1, TraesCS2D02G229100.2, TraesCS2D02G249900.2, TraesCS2D02G404200.1, TraesCS2D02G456400.1, TraesCS3A02G224900.1, TraesCS3A02G334200.1, TraesCS3B02G254500.1, TraesCS3B02G365200.1, TraesCS3D02G228700.1, TraesCS3D02G327700.3, TraesCS4A02G187900.1, TraesCS4A02G206200.2, TraesCS4B02G109800.2, TraesCS4B02G130300.1, TraesCS4B02G321800.1, TraesCS4D02G107200.1, TraesCS4D02G125500.1, TraesCS4D02G318400.2, TraesCS5A02G107900.1, TraesCS5A02G138300.1, TraesCS5A02G426500.1, TraesCS5A02G426800.2, TraesCS5A02G490200.1, TraesCS5B02G109300.1, TraesCS5B02G115400.1, TraesCS5B02G137600.1, TraesCS5B02G428400.2, TraesCS5B02G428700.1, TraesCS5D02G122800.1, TraesCS5D02G124000.1, TraesCS5D02G153800.1, TraesCS5D02G434500.2, TraesCS5D02G434800.2, TraesCS6A02G261200.1, TraesCS6A02G421000.1, TraesCS6B02G288600.1, TraesCS6B02G467300.1, TraesCS6D02G242000.2, TraesCS6D02G404800.1
Poaceae Zea mays 25 Zm00001eb002180_P002, Zm00001eb060110_P001 ...
Zm00001eb060140_P001, Zm00001eb072810_P001, Zm00001eb091710_P003, Zm00001eb093410_P001, Zm00001eb105890_P001, Zm00001eb117300_P001, Zm00001eb132720_P001, Zm00001eb139060_P001, Zm00001eb150340_P001, Zm00001eb159530_P001, Zm00001eb187630_P001, Zm00001eb190570_P003, Zm00001eb196210_P001, Zm00001eb200920_P001, Zm00001eb213240_P001, Zm00001eb213280_P001, Zm00001eb322620_P001, Zm00001eb344900_P001, Zm00001eb358560_P001, Zm00001eb369270_P001, Zm00001eb408020_P001, Zm00001eb428080_P002, Zm00001eb429270_P001
Poaceae Zoysia japonica 26 nbis-gene-11651, nbis-gene-11652, nbis-gene-14309 ...
nbis-gene-15295, nbis-gene-15301, nbis-gene-16423, nbis-gene-16426, nbis-gene-22235, nbis-gene-22667, nbis-gene-24732, nbis-gene-25547, nbis-gene-25717, nbis-gene-26926, nbis-gene-27145, nbis-gene-29210, nbis-gene-3052, nbis-gene-31376, nbis-gene-39729, nbis-gene-40127, nbis-gene-41249, nbis-gene-46280, nbis-gene-4637, nbis-gene-51510, nbis-gene-5665, nbis-gene-58716, nbis-gene-893
Poaceae Zoysia macrostachya 25 Zma_g10680, Zma_g11372, Zma_g16895, Zma_g17489, Zma_g17628 ...
Zma_g18473, Zma_g20228, Zma_g20310, Zma_g2166, Zma_g21853, Zma_g24690, Zma_g24805, Zma_g25812, Zma_g2607, Zma_g2610, Zma_g26954, Zma_g28895, Zma_g325, Zma_g329, Zma_g4513, Zma_g5227, Zma_g6018, Zma_g6519, Zma_g8248, Zma_g8840
Portulacaceae Portulaca oleracea 27 evm.TU.LG02.1571, evm.TU.LG02.1597, evm.TU.LG04.2007 ...
evm.TU.LG04.2740, evm.TU.LG06.1363, evm.TU.LG06.325, evm.TU.LG08.1423, evm.TU.LG08.1424, evm.TU.LG08.394, evm.TU.LG08.411, evm.TU.LG08.904, evm.TU.LG09.366, evm.TU.LG09.396, evm.TU.LG10.446, evm.TU.LG11.703, evm.TU.LG12.1756, evm.TU.LG17.444, evm.TU.LG18.1682, evm.TU.LG18.1898, evm.TU.LG18.866, evm.TU.LG19.1453, evm.TU.LG20.1005, evm.TU.LG20.203, evm.TU.LG20.24, evm.TU.LG22.1022, evm.TU.LG22.320, evm.TU.LG26.541
Posidoniaceae Posidonia oceanica 11 gene.Posoc01g30060, gene.Posoc02g10860, gene.Posoc03g00270 ...
gene.Posoc03g22970, gene.Posoc05g17090, gene.Posoc05g19840, gene.Posoc06g15500, gene.Posoc07g01720, gene.Posoc07g09200, gene.Posoc09g08230, gene.Posoc10g02880
Rhizophoraceae Bruguiera sexangula 13 evm.TU.60359.6, evm.TU.60360.6, evm.TU.Scaffold_12_RagTag.84 ...
evm.TU.Scaffold_12_RagTag.997, evm.TU.Scaffold_13_RagTag.980, evm.TU.Scaffold_16_RagTag.124, evm.TU.Scaffold_1_RagTag.1080, evm.TU.Scaffold_1_RagTag.1302, evm.TU.Scaffold_1_RagTag.1313, evm.TU.Scaffold_1_RagTag.2398, evm.TU.Scaffold_7_RagTag.1316, evm.TU.Scaffold_7_RagTag.409, evm.TU.Scaffold_8_RagTag.1558
Rhizophoraceae Carallia pectinifolia 12 nbisL1-mrna-18441, nbisL1-mrna-18865, nbisL1-mrna-22366 ...
nbisL1-mrna-23945, nbisL1-mrna-24716, nbisL1-mrna-30038, nbisL1-mrna-5171, nbisL1-mrna-6283, nbisL1-mrna-6293, nbisL1-mrna-6528, nbisL1-mrna-8661, nbisL1-mrna-9786
Rhizophoraceae Ceriops tagal 13 nbisL1-mrna-11869, nbisL1-mrna-13481, nbisL1-mrna-14683 ...
nbisL1-mrna-15705, nbisL1-mrna-1616, nbisL1-mrna-16693, nbisL1-mrna-18138, nbisL1-mrna-18146, nbisL1-mrna-20607, nbisL1-mrna-21442, nbisL1-mrna-3030, nbisL1-mrna-4401, nbisL1-mrna-5607
Rhizophoraceae Ceriops zippeliana 11 nbisL1-mrna-10185, nbisL1-mrna-13064, nbisL1-mrna-13286 ...
nbisL1-mrna-15130, nbisL1-mrna-18059, nbisL1-mrna-20361, nbisL1-mrna-21128, nbisL1-mrna-21701, nbisL1-mrna-3184, nbisL1-mrna-4129, nbisL1-mrna-4137
Rhizophoraceae Kandelia candel 12 evm.TU.utg000002l.299, evm.TU.utg000002l.469 ...
evm.TU.utg000015l.584, evm.TU.utg000016l.12, evm.TU.utg000016l.379, evm.TU.utg000016l.386, evm.TU.utg000016l.863, evm.TU.utg000018l.692, evm.TU.utg000018l.89, evm.TU.utg000022l.419, evm.TU.utg000027l.37, evm.TU.utg000027l.520
Rhizophoraceae Kandelia obovata 11 Maker00002891, Maker00003685, Maker00011661, Maker00011954 ...
Maker00014224, Maker00015898, Maker00016284, Maker00017007, Maker00017157, Maker00017396, Maker00017978
Rhizophoraceae Rhizophora apiculata 13 nbisL1-mrna-10705, nbisL1-mrna-11047, nbisL1-mrna-12505 ...
nbisL1-mrna-3560, nbisL1-mrna-4490, nbisL1-mrna-4571, nbisL1-mrna-5477, nbisL1-mrna-7550, nbisL1-mrna-7556, nbisL1-mrna-8769, nbisL1-mrna-9001, nbisL1-mrna-9438, nbisL1-mrna-9595
Rhizophoraceae Rhizophora mangle 13 nbisL1-mrna-11621, nbisL1-mrna-13288, nbisL1-mrna-13484 ...
nbisL1-mrna-13491, nbisL1-mrna-18522, nbisL1-mrna-18689, nbisL1-mrna-20083, nbisL1-mrna-20812, nbisL1-mrna-22522, nbisL1-mrna-22719, nbisL1-mrna-23273, nbisL1-mrna-5672, nbisL1-mrna-6724
Salicaceae Populus euphratica 18 populus_peu01795, populus_peu03631, populus_peu06041 ...
populus_peu10323, populus_peu12376, populus_peu12386, populus_peu15408, populus_peu16631, populus_peu18502, populus_peu18929, populus_peu19746, populus_peu19758, populus_peu19903, populus_peu25994, populus_peu26003, populus_peu34472, populus_peu36023, populus_peu36941
Solanaceae Lycium barbarum 23 gene-LOC132599409, gene-LOC132604552, gene-LOC132606303 ...
gene-LOC132606687, gene-LOC132607242, gene-LOC132607254, gene-LOC132607611, gene-LOC132609915, gene-LOC132613482, gene-LOC132616196, gene-LOC132617294, gene-LOC132617847, gene-LOC132625947, gene-LOC132625966, gene-LOC132626379, gene-LOC132626381, gene-LOC132626994, gene-LOC132628149, gene-LOC132636345, gene-LOC132639963, gene-LOC132640538, gene-LOC132643647, gene-LOC132644097
Solanaceae Solanum chilense 21 SOLCI000081300, SOLCI000797600, SOLCI000938600 ...
SOLCI001317800, SOLCI001503100, SOLCI002135400, SOLCI002419800, SOLCI002509900, SOLCI003123200, SOLCI003137500, SOLCI003180800, SOLCI003418400, SOLCI003459800, SOLCI003511500, SOLCI003952100, SOLCI004169900, SOLCI004439400, SOLCI004457200, SOLCI005394900, SOLCI005760100, SOLCI007434400
Solanaceae Solanum pennellii 22 gene-LOC107001743, gene-LOC107002153, gene-LOC107002236 ...
gene-LOC107004090, gene-LOC107004840, gene-LOC107005042, gene-LOC107005509, gene-LOC107007186, gene-LOC107007192, gene-LOC107008511, gene-LOC107009560, gene-LOC107014935, gene-LOC107015024, gene-LOC107015444, gene-LOC107018053, gene-LOC107018307, gene-LOC107018336, gene-LOC107020234, gene-LOC107021066, gene-LOC107025816, gene-LOC107029060, gene-LOC107032472
Tamaricaceae Reaumuria soongarica 16 STRG.11630_chr02_-, STRG.20675_chr08_-, STRG.23388_chr05_+ ...
STRG.26471_chr11_-, gene_10610, gene_1132, gene_12207, gene_13141, gene_13237, gene_15166, gene_15444, gene_16091, gene_17574, gene_17984, gene_18010, gene_2433
Tamaricaceae Tamarix chinensis 12 TC01G3176, TC02G1376, TC03G2351, TC04G2924, TC05G2719 ...
TC05G2733, TC05G2956, TC06G0885, TC07G1649, TC08G0080, TC09G2458, TC12G0868
Zosteraceae Zostera marina 2 Zosma02g24030.v3.1, Zosma02g25780.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.