Basic Information
Locus ID:
AH07.3286
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Sucrase/ferredoxin-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 50863696 | 50868135 | - | AH07.3286 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 46,497.22 Da | 40.94 | 74.99 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03062 | TRX_Fd_Sucrase | 197 | 299 | 2.27184E-41 | IPR009737 |
| Pfam | PF06999 | Sucrase/ferredoxin-like | 86 | 297 | 2.0E-43 | IPR009737 |
| SUPERFAMILY | SSF52833 | Thioredoxin-like | 199 | 301 | 2.12E-18 | IPR036249 |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 93 | 188 | 1.3E-5 | - |
| Gene3D | G3DSA:3.40.30.10 | Glutaredoxin | 197 | 298 | 1.4E-22 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 360 | 385 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26620.1 | Sucrase/ferredoxin-like family protein. | 6.23E-144 |
| RefSeq | XP_034571535.1 | uncharacterized protein LOC117836253 [Setaria viridis] | 1.87E-275 |
| C5DDQ4 | Altered inheritance of mitochondria protein 32 OS=Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) OX=559295 GN=AIM32 PE=3 SV=1 | 2.36E-16 | |
| TrEMBL | A0A3L6RWZ3 | Altered inheritance of mitochondria protein 32-like OS=Panicum miliaceum OX=4540 GN=C2845_PM11G27560 PE=4 SV=1 | 3.65E-277 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg19860, jg21618 |
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_12114, gene_17499 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah009115, Ah037208 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_4g090910, BVRB_6g143910 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg18575, Sbi_jg36986, Sbi_jg42041, Sbi_jg48098 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg27459, Seu_jg4845 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00008882, GOSA_00017290 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl23607, Sgl28815, Sgl28817, Sgl31296, Sgl36632 |
| Amaranthaceae | Chenopodium album | 6 | gene:ENSEOMG00000003784, gene:ENSEOMG00000005425 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.2BG0000440, CQ.Regalona.r1.6AG0011530 |
| Anacardiaceae | Pistacia vera | 4 | pistato.v30023060, pistato.v30152670, pistato.v30153090 ... |
| Apiaceae | Apium graveolens | 2 | Ag9G00448, Ag9G01008 |
| Arecaceae | Cocos nucifera | 3 | COCNU_01G006400, COCNU_01G006410, COCNU_11G011370 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103702385, gene-LOC103712852 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.542.V1.1, AsparagusV1_05.1393.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri13G11250, Ftri18G03070 |
| Brassicaceae | Arabidopsis thaliana | 4 | AT3G27570.1, AT4G26620.1, AT5G40510.1, AT5G55900.1 |
| Brassicaceae | Eutrema salsugineum | 4 | Thhalv10004412m.g.v1.0, Thhalv10015242m.g.v1.0 ... |
| Brassicaceae | Schrenkiella parvula | 4 | Sp2g16740.v2.2, Sp6g17750.v2.2, Sp7g01370.v2.2 ... |
| Brassicaceae | Brassica nigra | 7 | BniB01g026070.2N, BniB02g034640.2N, BniB02g067760.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G1500, Ceq02G1881 |
| Casuarinaceae | Casuarina glauca | 2 | Cgl01G1663, Cgl02G1962 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno02g05970 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g26920 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-2268, nbisL1-mrna-7314 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG05.2053, evm.TU.LG05.292 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00004361, Pov_00027841 |
| Plumbaginaceae | Limonium bicolor | 4 | Lb1G00856, Lb3G15734, Lb5G29231, Lb6G30764 |
| Poaceae | Echinochloa crus-galli | 3 | AH07.3286, BH07.3106, CH07.3172 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0143930, gene-QOZ80_2BG0199340 |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.1HG0056160.1, HORVU.MOREX.r3.6HG0611040.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_025259 |
| Poaceae | Oryza coarctata | 2 | Oco03G020340, Oco04G021000 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g49320.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G259600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0106007, Pt_Chr0203583 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr06G003360, Chr09G021290, Chr10G019680, Chr11G002980 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G359900, Tel6E01G523200 |
| Poaceae | Triticum dicoccoides | 5 | gene_TRIDC1AG031690, gene_TRIDC1BG037090 ... |
| Poaceae | Triticum aestivum | 7 | TraesCS1A02G210200.1, TraesCS1B02G224100.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb189050_P001, Zm00001eb253200_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-8865 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g14313 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.Contig9.3, evm.TU.LG09.1793, evm.TU.LG18.624 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc02g22270, gene.Posoc03g24030 |
| Rhizophoraceae | Bruguiera sexangula | 4 | evm.TU.Scaffold_3_RagTag.1930, evm.TU.Scaffold_6_RagTag.118 ... |
| Rhizophoraceae | Carallia pectinifolia | 4 | nbisL1-mrna-14936, nbisL1-mrna-19694, nbisL1-mrna-2410 ... |
| Rhizophoraceae | Ceriops tagal | 4 | nbisL1-mrna-4018, nbisL1-mrna-555, nbisL1-mrna-623 ... |
| Rhizophoraceae | Ceriops zippeliana | 4 | nbisL1-mrna-105, nbisL1-mrna-15048, nbisL1-mrna-22345 ... |
| Rhizophoraceae | Kandelia candel | 4 | evm.TU.utg000011l.86, evm.TU.utg000018l.32 ... |
| Rhizophoraceae | Kandelia obovata | 4 | Maker00002151, Maker00002893, Maker00007547, Maker00010546 |
| Rhizophoraceae | Rhizophora apiculata | 4 | nbisL1-mrna-11890, nbisL1-mrna-12029, nbisL1-mrna-7992 ... |
| Rhizophoraceae | Rhizophora mangle | 3 | nbisL1-mrna-17476, nbisL1-mrna-22581, nbisL1-mrna-23751 |
| Salicaceae | Populus euphratica | 3 | populus_peu00884, populus_peu01105, populus_peu38331 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132619247, gene-LOC132621364, gene-LOC132625225 |
| Solanaceae | Solanum chilense | 3 | SOLCI002307700, SOLCI003282200, SOLCI004254200 |
| Solanaceae | Solanum pennellii | 3 | gene-LOC107011040, gene-LOC107011451, gene-LOC107024118 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.6945_chr04_-, gene_14713 |
| Tamaricaceae | Tamarix chinensis | 2 | TC01G3570, TC05G2589 |
| Zosteraceae | Zostera marina | 1 | Zosma04g17770.v3.1 |