Basic Information
Locus ID:
AH07.319
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 3244844 | 3254737 | - | AH07.319 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 77,130.99 Da | 43.78 | 81.53 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00888 | Cullin family | 512 | 670 | 1.3E-19 | IPR001373 |
| Pfam | PF00069 | Protein kinase domain | 139 | 398 | 1.3E-47 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 124 | 401 | 3.64E-67 | IPR011009 |
| SUPERFAMILY | SSF74788 | Cullin repeat-like | 504 | 667 | 8.63E-21 | IPR016159 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 117 | 211 | 2.9E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 230 | 406 | 1.7E-48 | - |
| Gene3D | G3DSA:1.20.1310.10 | Cullin Repeats | 494 | 629 | 9.0E-16 | - |
| SMART | SM00220 | serkin_6 | 138 | 400 | 4.8E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 138 | 410 | 36.343475 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 144 | 166 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 267 | 279 | - | IPR008271 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 3.62E-48 |
| RefSeq | XP_039780621.1 | putative receptor-like protein kinase At4g00960 [Panicum virgatum] | 1.61E-145 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 3.56E-47 | |
| TrEMBL | A0A1E5V1C2 | Cysteine-rich receptor-like protein kinase 7 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0020061 PE=3 SV=1 | 1.47E-154 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 7 | AH07.316, AH07.318, AH07.319, BH07.413, CH03.4503, CH03.4504 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_046640, gene-QYE76_046668 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g55000.1 |