Basic Information
Locus ID:
AH07.2935
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 47602714 | 47606026 | + | AH07.2935 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 52,635.42 Da | 45.12 | 103.76 | 0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 91 | 466 | 2.0312E-45 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 11 | 426 | 3.6E-30 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 10 | 468 | 1.31E-40 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 6 | 470 | 1.4E-42 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 7 | 472 | 13.568105 | IPR020846 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 410 | 433 | 3.7E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 94 | 110 | 3.7E-6 | IPR001958 |
| PRINTS | PR01035 | Tetracycline resistance protein signature | 350 | 371 | 3.7E-6 | IPR001958 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 1.91E-131 |
| RefSeq | XP_025823450.1 | hippocampus abundant transcript 1 protein-like isoform X1 [Panicum hallii] | 3.6E-269 |
| A4IF94 | Hippocampus abundant transcript-like protein 1 OS=Bos taurus OX=9913 GN=MFSD14B PE=2 SV=1 | 3.15E-17 | |
| TrEMBL | C5Y1C8 | MFS domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3004G287600 PE=4 SV=1 | 9.27E-265 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology