Basic Information
Locus ID:
AH07.2450
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
No apical meristem (NAM) protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 41751209 | 41754443 | - | AH07.2450 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.56 | 69,228.26 Da | 57.12 | 70.80 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 292 | 435 | 8.3E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 275 | 454 | 1.7E-35 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 300 | 458 | 7.5E-27 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 291 | 454 | 28.778803 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 503 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 178 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 45 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01600.1 | NAC domain containing protein 44. | 3.51E-80 |
| RefSeq | XP_039790280.1 | NAC domain-containing protein 73-like isoform X2 [Panicum virgatum] | 8.57E-245 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 3.49E-73 | |
| TrEMBL | A0A3L6QEE7 | NAC domain-containing protein 73-like OS=Panicum miliaceum OX=4540 GN=C2845_PM12G19170 PE=4 SV=1 | 8.33E-246 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology