Basic Information
Locus ID:
AH07.2406
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 41299584 | 41302890 | - | AH07.2406 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.35 | 59,135.73 Da | 44.37 | 83.82 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 3 | 257 | 8.89265E-132 | - |
| Pfam | PF00069 | Protein kinase domain | 4 | 256 | 6.3E-66 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 290 | 1.89E-84 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 79 | 2.9E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 80 | 267 | 5.1E-59 | - |
| SMART | SM00220 | serkin_6 | 4 | 257 | 8.0E-89 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 4 | 257 | 46.534088 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 125 | 137 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 10 | 33 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 320 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 320 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20860.1 | NIMA-related kinase 5. Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 4.74E-150 |
| RefSeq | XP_034600517.1 | serine/threonine-protein kinase Nek6-like [Setaria viridis] | 0 |
| Q6YY75 | Serine/threonine-protein kinase Nek6 OS=Oryza sativa subsp. japonica OX=39947 GN=NEK6 PE=1 SV=2 | 6.98E-308 | |
| TrEMBL | A0A4U6WDL7 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_1G217900v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology