Basic Information
Locus ID:
AH07.2155
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 38375387 | 38376774 | - | AH07.2155 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 47,172.36 Da | 46.09 | 77.86 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 27 | 69 | 1.0E-4 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 215 | 301 | 1.7E-4 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 25 | 66 | 5.49E-6 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 27 | 67 | 2.5E-5 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 115 | 321 | 9.9E-24 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004974816.1 | F-box protein At3g07870 [Setaria italica] | 8.87E-67 |
| TrEMBL | A0A835FGJ5 | F-box domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_012297 PE=4 SV=1 | 4.42E-122 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology