Basic Information
Locus ID:
AH07.2040
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 36591386 | 36592740 | - | AH07.2040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 32,592.92 Da | 40.18 | 93.80 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 76 | 165 | 2.5E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 8 | 239 | 2.16E-28 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 5 | 74 | 1.7E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 75 | 271 | 9.3E-20 | - |
| SMART | SM00220 | serkin_6 | 13 | 242 | 7.1E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 295 | 14.435775 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 95 | 107 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24130.1 | Leucine-rich receptor-like protein kinase family protein. | 5.26E-42 |
| RefSeq | XP_034591356.1 | putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 [Setaria viridis] | 5.51E-99 |
| Q9ZUI0 | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana OX=3702 GN=At2g24130 PE=3 SV=1 | 5.23E-41 | |
| TrEMBL | A0A4U6UTH4 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_4G044400v2 PE=3 SV=1 | 1.25E-97 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||