Basic Information
Locus ID:
AH07.2019
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
CTR1
Description:
Ethylene-responsive protein kinase Le-CTR1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 36316748 | 36322659 | - | AH07.2019 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.24 | 98,807.28 Da | 51.87 | 77.14 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 627 | 858 | 7.4311E-122 | - |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 280 | 484 | 6.0E-67 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 622 | 860 | 1.2E-66 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 596 | 859 | 1.08E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 700 | 864 | 1.5E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 614 | 699 | 6.7E-37 | - |
| SMART | SM00220 | serkin_6 | 621 | 866 | 5.6E-57 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 621 | 914 | 42.166683 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 742 | 754 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 627 | 648 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 783 | 793 | 8.2E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 736 | 754 | 8.2E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 695 | 708 | 8.2E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 802 | 824 | 8.2E-9 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 108 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 3.72E-266 |
| RefSeq | XP_034601443.1 | serine/threonine-protein kinase CTR1-like isoform X1 [Setaria viridis] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 3.58E-265 | |
| TrEMBL | A0A4U6W9T2 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_1G181300v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology