HalophFGD

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Basic Information
Locus ID: AH07.1999
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Putative gypsy type transposon
Maps and Mapping Data
Chromosome Start End Strand ID
AH07 36013311 36015120 - AH07.1999
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
11.71 27,435.05 Da 83.73 62.07 -0.68
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 141 256 - -
MobiDBLite mobidb-lite consensus disorder prediction 64 82 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 26 - -
MobiDBLite mobidb-lite consensus disorder prediction 209 225 - -
MobiDBLite mobidb-lite consensus disorder prediction 55 119 - -
Best hit
Source Best Hit ID Description E-value
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 31 AH01.2488, AH03.1644, AH04.493, AH05.2836, AH05.3040 ...
AH05.86, AH06.1269, AH06.1351, AH06.1399, AH06.1416, AH06.1453, AH06.2936, AH06.701, AH07.1649, AH07.1999, AH07.2258, AH08.1185, AH09.287, BH04.2374, BH06.1094, BH08.2045, BH09.239, BH09.36, CH02.3772, CH03.2487, CH04.2472, CH05.3226, CH05.4135, CH06.1993, CH08.1341, CH09.460
Poaceae Oryza coarctata 1 Oco08G008550
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.