HalophFGD

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Basic Information
Locus ID: AH07.1862
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
AH07 32945574 32949334 + AH07.1862
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.72 57,598.69 Da 54.54 60.72 -0.49
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 495 517 - -
MobiDBLite mobidb-lite consensus disorder prediction 360 384 - -
MobiDBLite mobidb-lite consensus disorder prediction 495 509 - -
MobiDBLite mobidb-lite consensus disorder prediction 178 205 - -
MobiDBLite mobidb-lite consensus disorder prediction 131 154 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039781338.1 uncharacterized protein LOC120648720 [Panicum virgatum] 1.32E-48
TrEMBL A0A3L6TQ14 Myb_DNA-bind_3 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM01G33420 PE=4 SV=1 3.82E-25
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 16 AH01.2016, AH03.1812, AH04.1391, AH05.1654, AH05.1958 ...
AH06.133, AH06.1477, AH06.1751, AH07.1862, AH07.2887, AH08.1760, AH08.907, BH01.2065, BH01.3574, CH08.1750, CH09.2185
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.