Basic Information
Locus ID:
AH07.1629
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 27379260 | 27381632 | + | AH07.1629 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.73 | 47,743.13 Da | 64.06 | 84.18 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 43 | 143 | 2.8E-5 | IPR003653 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 12 | 181 | 1.5E-13 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 31 | 169 | 7.8E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 232 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039822122.1 | uncharacterized protein LOC120684314 [Panicum virgatum] | 1.41E-49 |
| TrEMBL | A0A8T0ML81 | ULP_PROTEASE domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_9NG284046 PE=3 SV=1 | 1.52E-46 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 9 | AH01.1897, AH04.860, AH07.1629, BH04.533, BH04.967, BH07.812 ... |
| Poaceae | Oryza coarctata | 6 | Oco03G009010, Oco05G016430, Oco09G004560, Oco10G016000 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os06g28030.1 |
| Poaceae | Sporobolus alterniflorus | 13 | Chr02G009070, Chr06G027180, Chr06G027640, Chr08G004160 ... |
| Poaceae | Zea mays | 1 | Zm00001eb262950_P001 |