Basic Information
Locus ID:
AH07.134
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 1438008 | 1439240 | - | AH07.134 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 46,080.35 Da | 51.04 | 81.56 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 2 | 37 | 1.5E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 2 | 53 | 2.35E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 36 | 2.0E-9 | - |
| SMART | SM00256 | fbox_2 | 1 | 40 | 4.3E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 112 | 310 | 1.5E-15 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50870.1 | F-box and associated interaction domains-containing protein. | 5.13E-11 |
| RefSeq | XP_034592004.1 | putative F-box protein At4g38870 [Setaria viridis] | 3.04E-178 |
| Q9C6J3 | Putative F-box protein At1g50870 OS=Arabidopsis thaliana OX=3702 GN=At1g50870 PE=4 SV=1 | 5.08E-10 | |
| TrEMBL | A0A4U6WA65 | F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_1G118300v2 PE=4 SV=1 | 5.52E-178 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology