Basic Information
Locus ID:
AH07.130
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 1420251 | 1423453 | + | AH07.130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.45 | 109,082.41 Da | 32.51 | 99.88 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 705 | 925 | 3.0E-42 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 525 | 584 | 9.7E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 65 | 7.3E-12 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 308 | 367 | 5.3E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 251 | 588 | 8.63E-72 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 703 | 988 | 8.09E-66 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 298 | 1.22E-58 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 797 | 1007 | 3.5E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 330 | 623 | 7.7E-84 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 260 | 329 | 5.1E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 703 | 796 | 1.7E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 186 | 4.3E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 259 | 1.0E-17 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 115 | 139 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 187 | 211 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 259 | 283 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 91 | 114 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 331 | 355 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 427 | 451 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 703 | 988 | 6.3E-24 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 547 | 571 | 360.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 703 | 995 | 35.891186 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 839 | 851 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 709 | 733 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 1.09E-157 |
| RefSeq | XP_034577954.1 | MDIS1-interacting receptor like kinase 1-like [Setaria viridis] | 1.37E-261 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 1.06E-156 | |
| TrEMBL | A0A2T7F0U5 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G007600 PE=3 SV=1 | 1.55E-260 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology