Basic Information
Locus ID:
AH07.1207
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 14135864 | 14139229 | - | AH07.1207 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.29 | 84,622.40 Da | 63.81 | 71.68 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 86 | 144 | 3.79E-6 | IPR036047 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 90 | 137 | 8.702637 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 653 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 554 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 644 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 757 | 778 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002442530.1 | uncharacterized protein LOC8084401 [Sorghum bicolor] | 3.03E-60 |
| TrEMBL | A0A835AY59 | DUF295 domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_049827 PE=4 SV=1 | 6.5E-119 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH07.1207, BH07.1289, CH07.1242 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2BG0162790 |