Basic Information
Locus ID:
AH07.1196
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 13974505 | 13979348 | - | AH07.1196 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 78,313.41 Da | 44.62 | 74.71 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 175 | 237 | 3.2E-16 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 310 | 455 | 1.5E-48 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 496 | 636 | 2.0E-34 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 187 | 234 | 2.7E-12 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 514 | 634 | 1.4E-129 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 308 | 513 | 1.4E-129 | IPR011990 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 368 | 402 | 9.996763 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 182 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 149 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 67 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 6.14E-101 |
| RefSeq | XP_025801517.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Panicum hallii] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 5.94E-100 | |
| TrEMBL | A0A2S3GNE1 | ribonuclease P OS=Panicum hallii OX=206008 GN=PAHAL_1G109700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology