Basic Information
Locus ID:
AH07.1102
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 12521856 | 12525563 | + | AH07.1102 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.68 | 70,978.45 Da | 42.70 | 80.98 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 180 | 287 | 1.8E-9 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 56 | 157 | 1.1E-9 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 481 | 535 | 4.5E-14 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 405 | 464 | 4.7E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 382 | 601 | 5.53E-47 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 364 | 470 | 9.4E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 471 | 550 | 8.1E-23 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 165 | 290 | 8.3E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 51 | 159 | 4.7E-11 | IPR038408 |
| SMART | SM00220 | serkin_6 | 404 | 605 | 4.1E-9 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 166 | 290 | 15.094827 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 46 | 150 | 12.08953 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 404 | 660 | 19.071726 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 501 | 513 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 410 | 432 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23230.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 15. Encodes a cysteine-rich receptor-like protein kinase. | 3.22E-80 |
| RefSeq | XP_034601041.1 | cysteine-rich receptor-like protein kinase 15 [Setaria viridis] | 1.52E-241 |
| Q8W4G6 | Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana OX=3702 GN=CRK15 PE=2 SV=2 | 3.13E-79 | |
| TrEMBL | A0A4U6UG24 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_6G092500v2 PE=4 SV=1 | 3.43E-240 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology