Basic Information
Locus ID:
AH07.1100
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 12441170 | 12445550 | - | AH07.1100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 78,111.24 Da | 48.64 | 82.41 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 383 | 649 | 9.31659E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 378 | 644 | 7.1E-44 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 176 | 275 | 5.2E-14 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 56 | 153 | 5.0E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 360 | 649 | 1.62E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 164 | 278 | 1.3E-22 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 452 | 664 | 7.2E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 344 | 451 | 2.5E-30 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 50 | 156 | 7.4E-11 | IPR038408 |
| SMART | SM00220 | serkin_6 | 377 | 654 | 2.0E-31 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 43 | 147 | 11.709341 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 377 | 654 | 37.67207 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 163 | 278 | 17.683727 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 383 | 405 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 497 | 509 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 710 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 674 | 717 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23230.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 15. Encodes a cysteine-rich receptor-like protein kinase. | 1.41E-136 |
| RefSeq | XP_004973064.1 | cysteine-rich receptor-like protein kinase 15 [Setaria italica] | 0 |
| Q8W4G6 | Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana OX=3702 GN=CRK15 PE=2 SV=2 | 1.36E-135 | |
| TrEMBL | A0A368RJU2 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_6G092500v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology