Basic Information
Locus ID:
AH07.1041
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH07 | 11542740 | 11545938 | - | AH07.1041 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 109,119.67 Da | 38.74 | 93.03 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 685 | 975 | 1.92024E-88 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 129 | 150 | 1.6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 75 | 8.5E-7 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 682 | 973 | 1.0E-39 | IPR000719 |
| Pfam | PF13516 | Leucine Rich repeat | 519 | 532 | 0.98 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 300 | 358 | 3.7E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 659 | 975 | 8.88E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 299 | 600 | 1.73E-39 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 359 | 1.87E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 193 | 2.0E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 298 | 1.8E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 612 | 2.2E-71 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 662 | 772 | 3.5E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 773 | 1002 | 2.6E-61 | - |
| SMART | SM00369 | LRR_typ_2 | 516 | 539 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 250 | 274 | 160.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 679 | 976 | 1.4E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 345 | 369 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 101 | 125 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 321 | 344 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 540 | 563 | 76.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 679 | 976 | 37.50246 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 518 | 540 | 7.527138 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 685 | 706 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 821 | 833 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 104 | 117 | 3.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 540 | 553 | 3.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 6.28E-88 |
| RefSeq | XP_004954582.1 | receptor-like protein kinase 5 [Setaria italica] | 3.63E-282 |
| F4I2N7 | Receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=RLK7 PE=1 SV=1 | 7.67E-68 | |
| TrEMBL | K3YPL1 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101755460 PE=3 SV=1 | 8.21E-281 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology