halophFGD

Basic Information

Locus ID: AH06.87

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: F-box-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
AH06	718957	724470	-	AH06.87

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.87	49,100.87 Da	36.98	81.50	-0.35

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF08268	F-box associated domain	6	87	1.6E-5	IPR013187

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_044397856.1	F-box protein At3g07870-like isoform X2 [Triticum aestivum]	2.59E-62
TrEMBL	A0A835AMG7	FBA_3 domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_056483 PE=4 SV=1	3.02E-118

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	7	AH03.2319, AH06.87, BH03.2454, CH03.2648, CH03.2649, CH06.82 ... CH03.2651
Poaceae	Eleusine coracana subsp. coracana	7	gene-QOZ80_6AG0533780, gene-QOZ80_6AG0538870 ... gene-QOZ80_6AG0538880, gene-QOZ80_6AG0538890, gene-QOZ80_6BG0492150, gene-QOZ80_6BG0492160, gene-QOZ80_6BG0492210
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.2HG0195230.1.CDS1 ... HORVU.MOREX.r3.5HG0477220.1.CDS1, HORVU.MOREX.r3.5HG0489060.1.CDS1, HORVU.MOREX.r3.5HG0489110.1
Poaceae	Lolium multiflorum	13	gene-QYE76_003498, gene-QYE76_004274, gene-QYE76_004797 ... gene-QYE76_005988, gene-QYE76_005991, gene-QYE76_005995, gene-QYE76_005996, gene-QYE76_006035, gene-QYE76_006036, gene-QYE76_006039, gene-QYE76_006364, gene-QYE76_006492, gene-QYE76_030931
Poaceae	Oryza coarctata	4	Oco17G003620, Oco17G007470, Oco17G009530, Oco18G003640
Poaceae	Oryza sativa	4	LOC_Os09g20650.1, LOC_Os09g30170.1, LOC_Os09g30180.1 ... LOC_Os09g34200.1
Poaceae	Paspalum vaginatum	2	gene-BS78_02G167800, gene-BS78_02G217500
Poaceae	Puccinellia tenuiflora	9	Pt_Chr0701658, Pt_Chr0701661, Pt_Chr0701662, Pt_Chr0701663 ... Pt_Chr0701693, Pt_Chr0701696, Pt_Chr0701697, Pt_Chr0701699, Pt_Chr0702428
Poaceae	Sporobolus alterniflorus	13	Chr0G015190, Chr0G015200, Chr10G007830, Chr10G007840 ... Chr10G007850, Chr10G011140, Chr11G011130, Chr11G011290, Chr14G015880, Chr14G015890, Chr21G012180, Chr21G014920, Chr21G014930
Poaceae	Thinopyrum elongatum	7	Tel5E01G330000, Tel5E01G406100, Tel5E01G406200 ... Tel5E01G406300, Tel5E01G406400, Tel5E01G406600, Tel5E01G414700
Poaceae	Triticum dicoccoides	18	gene_TRIDC5AG031850, gene_TRIDC5AG039550 ... gene_TRIDC5AG039570, gene_TRIDC5AG039600, gene_TRIDC5AG039610, gene_TRIDC5AG039620, gene_TRIDC5AG039650, gene_TRIDC5AG039660, gene_TRIDC5AG039670, gene_TRIDC5BG033480, gene_TRIDC5BG042010, gene_TRIDC5BG042020, gene_TRIDC5BG042040, gene_TRIDC5BG042050, gene_TRIDC5BG042070, gene_TRIDC5BG042080, gene_TRIDC5BG042120, gene_TRIDC5BG042130
Poaceae	Triticum aestivum	33	TraesCS2B02G484400.1, TraesCS2D02G463300.1 ... TraesCS5A02G188400.1.cds1, TraesCS5A02G253800.1.cds1, TraesCS5A02G253900.2, TraesCS5A02G254000.1, TraesCS5A02G254100.1, TraesCS5A02G254200.2, TraesCS5A02G254300.1, TraesCS5A02G254400.1, TraesCS5A02G254500.1, TraesCS5B02G195200.1.cds1, TraesCS5B02G252700.1.cds1, TraesCS5B02G252800.2, TraesCS5B02G252900.3, TraesCS5B02G253000.1, TraesCS5B02G253100.1, TraesCS5B02G253200.3, TraesCS5B02G253300.3, TraesCS5B02G253400.1, TraesCS5B02G253500.2, TraesCS5B02G253600.1, TraesCS5D02G202600.1.cds1, TraesCS5D02G261400.1.cds1, TraesCS5D02G261500.1, TraesCS5D02G261600.4, TraesCS5D02G261700.1, TraesCS5D02G261800.1, TraesCS5D02G261900.3, TraesCS5D02G262000.1.cds1, TraesCS5D02G262100.2, TraesCS5D02G262200.1, TraesCS5D02G262300.1
Poaceae	Zea mays	2	Zm00001eb101520_P001, Zm00001eb311420_P001
Poaceae	Zoysia japonica	4	nbis-gene-19550, nbis-gene-19552, nbis-gene-19553 ... nbis-gene-30501
Poaceae	Zoysia macrostachya	5	Zma_g30238, Zma_g30509, Zma_g32489, Zma_g32745, Zma_g32746