Basic Information
Locus ID:
AH06.866
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Mitochondrial transcription termination factor family protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 8858542 | 8861924 | + | AH06.866 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.19 | 72,270.43 Da | 60.46 | 71.43 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.25.70.10 | Transcription termination factor 3, mitochondrial | 236 | 360 | 8.8E-15 | IPR038538 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 651 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 402 | 424 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 655 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_004965023.1 | transcription termination factor MTERF8, chloroplastic-like [Setaria italica] | 8.77E-28 |
| TrEMBL | A0A835EWC7 | Transcription termination factor MTEF1, chloroplastic OS=Digitaria exilis OX=1010633 GN=HU200_024856 PE=3 SV=1 | 3.21E-35 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||