halophFGD

Basic Information

Locus ID: AH06.86

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
AH06	716381	718673	+	AH06.86

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.82	48,427.20 Da	51.29	85.42	-0.07

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	1	36	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	18	32	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_025810405.1	putative F-box protein At3g25750 [Panicum hallii]	8.5E-230
TrEMBL	A0A2S3HMW9	DUF295 domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_4G350500 PE=4 SV=1	1.92E-228

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.2BG0003750
Arecaceae	Phoenix dactylifera	1	gene-LOC103723243
Asparagaceae	Asparagus officinalis	3	AsparagusV1_08.121.V1.1, AsparagusV1_08.122.V1.1 ... AsparagusV1_08.40.V1.1
Poaceae	Echinochloa crus-galli	25	AH01.2804, AH03.1765, AH04.81, AH05.36, AH06.2219, AH06.81 ... AH06.82, AH06.86, AH06.91, BH01.3139, BH04.87, BH05.38, BH06.152, BH06.88, BH06.92, BH06.93, BH06.96, CH02.1611, CH02.1619, CH04.132, CH05.65, CH06.77, CH06.81, CH06.86, CH08.603
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_6AG0506380, gene-QOZ80_6AG0506930 ... gene-QOZ80_6BG0458480, gene-QOZ80_6BG0458500, gene-QOZ80_6BG0459000
Poaceae	Hordeum vulgare	21	HORVU.MOREX.r3.1HG0042080.1.CDS1 ... HORVU.MOREX.r3.3HG0218540.1.CDS1, HORVU.MOREX.r3.4HG0415680.1.CDS1, HORVU.MOREX.r3.5HG0531860.1, HORVU.MOREX.r3.6HG0593850.1.CDS1, HORVU.MOREX.r3.6HG0633570.1, HORVU.MOREX.r3.6HG0633580.1.CDS1, HORVU.MOREX.r3.6HG0633650.1.CDS1, HORVU.MOREX.r3.7HG0639160.1.CDS1, HORVU.MOREX.r3.7HG0639300.1, HORVU.MOREX.r3.7HG0639330.1, HORVU.MOREX.r3.7HG0639340.1.CDS1, HORVU.MOREX.r3.7HG0639400.1, HORVU.MOREX.r3.7HG0639630.1.CDS1, HORVU.MOREX.r3.7HG0640210.1.CDS1, HORVU.MOREX.r3.7HG0640300.1, HORVU.MOREX.r3.7HG0648050.1.CDS1, HORVU.MOREX.r3.7HG0703120.1.CDS1, HORVU.MOREX.r3.7HG0728610.1, HORVU.MOREX.r3.7HG0730740.1, HORVU.MOREX.r3.UnG0786460.1.CDS1
Poaceae	Lolium multiflorum	6	gene-QYE76_007342, gene-QYE76_007345, gene-QYE76_009179 ... gene-QYE76_036742, gene-QYE76_043311, gene-QYE76_056319
Poaceae	Oryza coarctata	5	Oco11G000690, Oco11G000700, Oco11G000710, Oco11G000720 ... Oco12G000580
Poaceae	Oryza sativa	4	LOC_Os06g02100.1, LOC_Os06g02110.1, LOC_Os06g02330.1 ... LOC_Os06g02340.1
Poaceae	Paspalum vaginatum	6	gene-BS78_10G009200, gene-BS78_10G009300 ... gene-BS78_10G009400, gene-BS78_10G009600, gene-BS78_10G009900, gene-BS78_10G010800
Poaceae	Puccinellia tenuiflora	11	Pt_Chr0300009, Pt_Chr0300011, Pt_Chr0303130, Pt_Chr0303181 ... Pt_Chr0303708, Pt_Chr0307034, Pt_Chr0404181, Pt_Chr0602145, Pt_Chr0605869, Pt_Chr0700537, Pt_Chr0700592
Poaceae	Sporobolus alterniflorus	4	Chr10G000460, Chr10G000470, Chr11G024480, Chr11G024490
Poaceae	Thinopyrum elongatum	21	Tel1E01G530500, Tel2E01G282600, Tel3E01G006100 ... Tel3E01G598100, Tel5E01G820100, Tel6E01G776500, Tel6E01G776600, Tel7E01G068500, Tel7E01G068600, Tel7E01G069400, Tel7E01G069600, Tel7E01G074100, Tel7E01G074400, Tel7E01G076000, Tel7E01G076100, Tel7E01G076200, Tel7E01G076300, Tel7E01G089200, Tel7E01G089600, Tel7E01G710500, Tel7E01G710700
Poaceae	Triticum dicoccoides	28	gene_TRIDC1AG048330, gene_TRIDC2AG017290 ... gene_TRIDC4AG052090, gene_TRIDC4AG052150, gene_TRIDC4AG052210, gene_TRIDC4AG066800, gene_TRIDC4AG066830, gene_TRIDC4AG067040, gene_TRIDC4AG067070, gene_TRIDC4AG067140, gene_TRIDC5BG078370, gene_TRIDC5BG078410, gene_TRIDC5BG078430, gene_TRIDC5BG078450, gene_TRIDC6AG050470, gene_TRIDC6AG061260, gene_TRIDC6BG071280, gene_TRIDC6BG071290, gene_TRIDC7AG003210, gene_TRIDC7AG003230, gene_TRIDC7AG003450, gene_TRIDC7AG003570, gene_TRIDC7AG003640, gene_TRIDC7AG004200, gene_TRIDC7AG059320, gene_TRIDC7AG059340, gene_TRIDC7BG052260, gene_TRIDC7BG054320
Poaceae	Triticum aestivum	92	TraesCS1A02G325300.1, TraesCS1D02G326500.1.cds1 ... TraesCS2B02G164700.1, TraesCS2B02G164900.1, TraesCS2B02G165300.1, TraesCS2D02G143600.1, TraesCS2D02G144000.1, TraesCS2D02G144100.1, TraesCS3A02G375800.1, TraesCS3B02G408000.1.cds1, TraesCS3B02G408100.1, TraesCS3B02G605900.1.cds1, TraesCS3D02G368300.1, TraesCS3D02G491000.1.cds1, TraesCS3D02G491200.1, TraesCS4A02G345600.1.cds1, TraesCS4A02G346200.1, TraesCS4A02G346500.4, TraesCS4A02G346600.1.cds1, TraesCS4A02G424300.1.cds1, TraesCS4A02G446200.1, TraesCS4A02G451300.1.cds1, TraesCS4A02G451500.1.cds1, TraesCS4A02G451800.1.cds1, TraesCS4A02G452000.1, TraesCS4A02G452100.1, TraesCS4A02G452900.1.cds1, TraesCS4A02G453200.1, TraesCS4A02G453300.1, TraesCS4A02G453500.1, TraesCS4A02G454000.1.cds1, TraesCS4A02G454100.1.cds1, TraesCS4A02G454600.1.cds1, TraesCS4A02G455400.1.cds1, TraesCS4A02G455500.1.cds1, TraesCS4A02G455600.1, TraesCS4A02G455700.1.cds1, TraesCS5B02G526700.1, TraesCS5B02G526800.2, TraesCS5B02G526900.2, TraesCS5D02G525900.2, TraesCS5D02G526000.1, TraesCS5D02G526400.1, TraesCS6A02G062900.1.cds1, TraesCS6A02G372900.1, TraesCS6A02G417400.1.cds1, TraesCS6B02G471800.1.cds1, TraesCS6B02G471900.1.cds1, TraesCS6B02G472000.1.cds1, TraesCS6D02G062000.1, TraesCS6D02G357000.1, TraesCS7A02G011800.1, TraesCS7A02G033800.1.cds1, TraesCS7A02G034000.1, TraesCS7A02G034100.1.cds1, TraesCS7A02G035400.1, TraesCS7A02G036600.2, TraesCS7A02G036700.1, TraesCS7A02G037200.1, TraesCS7A02G042000.1, TraesCS7A02G064900.1, TraesCS7A02G202500.1.cds1, TraesCS7A02G202600.1.cds1, TraesCS7A02G425600.1, TraesCS7A02G425800.1, TraesCS7A02G471600.1.cds1, TraesCS7A02G471700.1.cds1, TraesCS7B02G109600.1, TraesCS7B02G326500.1, TraesCS7B02G389200.1.cds1, TraesCS7B02G448700.1.cds1, TraesCS7B02G448800.1.cds1, TraesCS7D02G030300.1.cds1, TraesCS7D02G030500.1, TraesCS7D02G030600.1.cds1, TraesCS7D02G031900.1, TraesCS7D02G032200.2, TraesCS7D02G032900.1, TraesCS7D02G033300.1.cds1, TraesCS7D02G033600.1.cds1, TraesCS7D02G033700.1, TraesCS7D02G033800.1.cds1, TraesCS7D02G033900.1, TraesCS7D02G037500.1.cds1, TraesCS7D02G037600.1.cds1, TraesCS7D02G059500.1, TraesCS7D02G077700.1.cds1, TraesCS7D02G205900.1.cds1, TraesCS7D02G418100.1, TraesCS7D02G430100.1, TraesCSU02G161600.1.cds1, TraesCSU02G164500.1.cds1
Poaceae	Zea mays	2	Zm00001eb302270_P001, Zm00001eb378970_P001
Poaceae	Zoysia japonica	2	nbis-gene-40240, nbis-gene-40241
Poaceae	Zoysia macrostachya	2	Zma_g28991, Zma_g28992