Basic Information
Locus ID:
AH06.3028
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
beta-N-acetylhexosaminidase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 46858232 | 46859215 | + | AH06.3028 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 34,069.91 Da | 43.87 | 64.89 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06921 | ChtBD1_GH19_hevein | 25 | 62 | 1.75957E-17 | - |
| CDD | cd00325 | chitinase_GH19 | 91 | 321 | 7.61874E-121 | - |
| Pfam | PF00182 | Chitinase class I | 90 | 321 | 4.1E-135 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 26 | 63 | 3.7E-13 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 26 | 65 | 7.2E-11 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 87 | 327 | 1.07E-112 | IPR023346 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 173 | 230 | 1.7E-124 | - |
| Gene3D | G3DSA:1.10.530.10 | - | 95 | 327 | 1.7E-124 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 24 | 67 | 3.9E-16 | IPR036861 |
| SMART | SM00270 | ChitinBD_3 | 26 | 63 | 1.4E-16 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 327 | 4.0E-132 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 24 | 65 | 11.169259 | IPR001002 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 108 | 130 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 36 | 55 | - | IPR018371 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 234 | 244 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 42 | 49 | 6.5E-7 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 49 | 56 | 6.5E-7 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 34 | 42 | 6.5E-7 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 3.37E-161 |
| RefSeq | XP_039843808.1 | chitinase 1-like [Panicum virgatum] | 4.09E-190 |
| Q42993 | Chitinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Cht1 PE=2 SV=1 | 9.93E-180 | |
| TrEMBL | A0A8T0TWU9 | chitinase OS=Panicum virgatum OX=38727 GN=PVAP13_4KG114700 PE=4 SV=1 | 9.26E-189 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology