Basic Information
Locus ID:
AH06.2936
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Putative gypsy type transposon
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 46166909 | 46170178 | + | AH06.2936 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.74 | 73,469.35 Da | 59.03 | 78.31 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 206 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 343 | - | - |
| Coils | Coil | Coil | 472 | 524 | - | - |
| Coils | Coil | Coil | 561 | 581 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034576780.1 | uncharacterized protein LOC117840382 [Setaria viridis] | 1.01E-14 |
| TrEMBL | A0A4U6VCX0 | Titin-like OS=Setaria viridis OX=4556 GN=SEVIR_4G147300v2 PE=4 SV=1 | 4.79E-19 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||