Basic Information
Locus ID:
AH06.2807
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 45202807 | 45216086 | + | AH06.2807 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 192,387.52 Da | 50.45 | 80.60 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 1077 | 1144 | 9.5E-17 | IPR025312 |
| Pfam | PF00069 | Protein kinase domain | 264 | 514 | 3.1E-34 | IPR000719 |
| Pfam | PF13963 | Transposase-associated domain | 712 | 757 | 5.1E-13 | IPR029480 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 902 | 953 | 4.6E-9 | IPR025452 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 262 | 525 | 1.89E-61 | IPR011009 |
| Gene3D | G3DSA:1.20.930.20 | - | 34 | 145 | 7.9E-14 | IPR036537 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 260 | 322 | 4.8E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 323 | 525 | 1.9E-50 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 242 | 520 | 29.007927 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 367 | 379 | - | IPR008266 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 522 | 595 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 595 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1674 | 1722 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 538 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 547 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1681 | 1710 | - | - |
| Coils | Coil | Coil | 70 | 90 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23280.2 | - | 2.45E-70 |
| RefSeq | XP_039804273.1 | cysteine-rich receptor-like protein kinase 10 [Panicum virgatum] | 4.81E-262 |
| O65479 | Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=CRK20 PE=2 SV=2 | 2.49E-69 | |
| TrEMBL | A0A2T7DUT4 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_4G033300 PE=4 SV=1 | 1.18E-262 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 21 | AH03.846, AH06.2807, AH08.1580, AH09.657, BH01.2974, BH06.72 ... |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_8BG0662420 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_041727 |
| Poaceae | Oryza coarctata | 6 | Oco04G010980, Oco07G006700, Oco09G013450, Oco10G000820 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os05g36240.1, LOC_Os07g05840.1, LOC_Os11g41770.1 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0205778 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr17G011710, Chr29G008210 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC5AG051480 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-28977, nbis-gene-48363 |
| Poaceae | Zoysia macrostachya | 5 | Zma_g10227, Zma_g23699, Zma_g23855, Zma_g32507, Zma_g32508 |