Basic Information
Locus ID:
AH06.2661
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 43853499 | 43856472 | - | AH06.2661 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.77 | 22,761.86 Da | 61.65 | 82.89 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH06.2661, AH09.704, BH05.2377, BH09.723, CH07.956, CH09.778 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0321360, gene-QOZ80_4BG0357080 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0160850.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_043508 |
| Poaceae | Oryza coarctata | 1 | Oco07G003540 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g30470.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G057300 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0303088, Pt_Chr0303106 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr23G015350, Chr26G004500 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G499700 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG040240, gene_TRIDC2BG043280 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G278300.1, TraesCS2B02G295900.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb420580_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-44969 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g19519 |