Basic Information
Locus ID:
AH06.2612
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 43417156 | 43418356 | - | AH06.2612 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.83 | 40,430.60 Da | 44.58 | 97.24 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 18 | 155 | 1.14746E-9 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 190 | 295 | 1.6E-21 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 174 | 295 | 1.22E-25 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 13 | 160 | 3.6E-12 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 172 | 293 | 1.7E-31 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 299 | 365 | 8.7E-19 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 16 | 159 | 2.5E-10 | IPR008974 |
| SMART | SM00225 | BTB_4 | 194 | 299 | 3.2E-19 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 194 | 256 | 15.824776 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 3.52E-63 |
| RefSeq | XP_039844400.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 1.29E-158 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 3.41E-62 | |
| TrEMBL | A0A1E5ULY1 | BTB/POZ and MATH domain-containing protein 2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0025099 PE=4 SV=1 | 6.56E-161 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology