Basic Information
Locus ID:
AH06.2550
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 42853172 | 42860241 | + | AH06.2550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.05 | 104,635.17 Da | 53.53 | 88.28 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 307 | 366 | 2.0E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 695 | 964 | 7.8E-32 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 664 | 964 | 2.6E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 235 | 425 | 7.94E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 222 | 441 | 8.9E-40 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 973 | 8.7E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 666 | 766 | 8.0E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 967 | 28.908989 | IPR000719 |
| PRINTS | PR01217 | Proline rich extensin signature | 443 | 459 | 5.9E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 633 | 645 | 5.9E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 477 | 498 | 5.9E-10 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 463 | 475 | 5.9E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 600 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 494 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 557 | 619 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 441 | 493 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03390.1 | STRUBBELIG-receptor family 3. | 3.12E-162 |
| RefSeq | XP_034590642.1 | protein STRUBBELIG-RECEPTOR FAMILY 3-like [Setaria viridis] | 0 |
| Q6R2K3 | Protein STRUBBELIG-RECEPTOR FAMILY 3 OS=Arabidopsis thaliana OX=3702 GN=SRF3 PE=1 SV=1 | 3.02E-161 | |
| TrEMBL | K3XV13 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology