Basic Information
Locus ID:
AH06.2508
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 42451579 | 42452905 | + | AH06.2508 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 45,450.79 Da | 39.56 | 80.80 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 49 | 314 | 2.22056E-99 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 46 | 313 | 1.3E-39 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 342 | 3.42E-76 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 19 | 118 | 8.4E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 119 | 325 | 3.6E-58 | - |
| SMART | SM00220 | serkin_6 | 43 | 313 | 1.8E-24 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 43 | 321 | 35.566105 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 49 | 71 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 165 | 177 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 353 | 375 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 378 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G52540.2 | - | 4.62E-110 |
| RefSeq | XP_004965690.1 | PTI1-like tyrosine-protein kinase At3g15890 [Setaria italica] | 2.02E-262 |
| Q9LSC2 | PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana OX=3702 GN=At3g15890 PE=2 SV=1 | 2.94E-105 | |
| TrEMBL | K3XX64 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101764735 PE=3 SV=1 | 4.57E-261 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology