Basic Information
Locus ID:
AH06.2379
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 41075450 | 41080614 | - | AH06.2379 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 76,889.10 Da | 38.83 | 92.51 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 415 | 686 | 3.52463E-91 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 2.2E-5 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 141 | 162 | 0.6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 412 | 682 | 6.2E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 238 | 5.67E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 392 | 683 | 3.19E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 486 | 4.6E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 256 | 2.9E-48 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 487 | 704 | 2.8E-57 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 409 | 686 | 36.894699 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 141 | 163 | 7.157505 | IPR001611 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 252 | 276 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22130.1 | STRUBBELIG-receptor family 8. | 5.16E-213 |
| RefSeq | XP_039807433.1 | protein STRUBBELIG-RECEPTOR FAMILY 8-like isoform X1 [Panicum virgatum] | 0 |
| Q6R2J8 | Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana OX=3702 GN=SRF8 PE=1 SV=1 | 4.96E-212 | |
| TrEMBL | A0A2T7DWB0 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_4G076300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology