Basic Information
Locus ID:
AH06.2296
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 39947007 | 39949633 | - | AH06.2296 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.84 | 62,251.29 Da | 47.98 | 82.83 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 69 | 2.0E-8 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 100 | 118 | 0.23 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 60 | 377 | 1.55E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 273 | 380 | 1.8E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 272 | 2.1E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 190 | 5.1E-37 | IPR032675 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 22 | 5.0 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 416 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72300.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat receptor kinase (LRR-RK) involved in the perception of PSY1. PSY1 is an 18-aa tyrosine-sulfated glycopeptide encoded by AT5G58650 that promotes cellular proliferation and expansion. | 4.65E-9 |
| RefSeq | XP_039806391.1 | receptor-like protein 52 [Panicum virgatum] | 9.41E-48 |
| Q9C7S5 | Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana OX=3702 GN=PSY1R PE=1 SV=1 | 4.62E-8 | |
| TrEMBL | A0A8T0TDH7 | LRRNT_2 domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG180911 PE=4 SV=1 | 2.13E-46 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology