Basic Information
Locus ID:
AH06.2135
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 37702432 | 37705879 | + | AH06.2135 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 113,935.55 Da | 42.38 | 107.09 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 409 | 443 | 1.2E-7 | IPR025875 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 757 | 1021 | 3.3E-30 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 653 | 711 | 6.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 68 | 3.9E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 485 | 737 | 1.93E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 763 | 1023 | 1.04E-53 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 256 | 569 | 3.53E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 283 | 2.04E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 822 | 1037 | 1.7E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 286 | 7.9E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 429 | 752 | 4.8E-85 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 753 | 821 | 5.4E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 181 | 2.0E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 428 | 4.7E-35 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 96 | 119 | 130.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 311 | 335 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 698 | 723 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 531 | 555 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 431 | 458 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 120 | 144 | 94.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 721 | 1019 | 6.4E-11 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 626 | 650 | 51.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 706 | 1028 | 27.255312 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 870 | 882 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G47580.1 | Leucine-rich repeat protein kinase family protein. | 6.43E-68 |
| RefSeq | XP_039843882.1 | probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Panicum virgatum] | 4.31E-227 |
| C0LGP4 | Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana OX=3702 GN=At3g47570 PE=2 SV=1 | 2.26E-65 | |
| TrEMBL | A0A8T0TU85 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4KG301300 PE=3 SV=1 | 6.98E-233 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||