Basic Information
Locus ID:
AH06.2071
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 36468926 | 36470616 | + | AH06.2071 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 27,725.28 Da | 26.00 | 83.02 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 38 | 216 | 1.2E-35 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 220 | 6.61E-54 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 109 | 6.4E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 130 | 229 | 3.1E-26 | - |
| SMART | SM00220 | serkin_6 | 37 | 240 | 4.7E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 242 | 30.859482 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 66 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 177 | 189 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.4 | - | 8.29E-39 |
| RefSeq | XP_039805048.1 | homeodomain-interacting protein kinase 2-like [Panicum virgatum] | 1.11E-110 |
| Q39086 | Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1 | 1.33E-37 | |
| TrEMBL | A0A0A9IPY4 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1 | 1.8E-109 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH06.2071, CH06.2106 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G222400, gene-BS78_K043500 |