Basic Information
Locus ID:
AH06.2058
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Broad-Complex, Tramtrack and Bric a brac
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 36251973 | 36252623 | - | AH06.2058 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 23,597.78 Da | 40.26 | 74.03 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 21 | 151 | 2.80236E-15 | IPR002083 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 20 | 156 | 1.54E-18 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 20 | 155 | 2.6E-15 | IPR008974 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 20 | 150 | 9.447195 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_051200933.1 | BTB/POZ and MATH domain-containing protein 1-like [Lolium perenne] | 1.05E-33 |
| TrEMBL | A0A5J9W3W3 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09070 PE=4 SV=1 | 1.94E-44 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 6 | AH05.1237, AH06.2058, AH08.728, AH08.759, BH08.738 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_000485, gene-QYE76_000491 |
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G606100, Tel7E01G877400 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-51292 |