Basic Information
Locus ID:
AH06.2009
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 35365214 | 35368122 | + | AH06.2009 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.55 | 104,324.90 Da | 32.45 | 105.40 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 664 | 939 | 2.15194E-96 | - |
| Pfam | PF00069 | Protein kinase domain | 661 | 935 | 2.5E-45 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 122 | 142 | 1.2 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 147 | 206 | 8.8E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 70 | 1.1E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 194 | 574 | 4.42E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 283 | 1.02E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 644 | 937 | 8.2E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 739 | 939 | 2.2E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 290 | 597 | 5.1E-75 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 643 | 738 | 2.3E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 289 | 1.8E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 187 | 1.1E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 96 | 120 | 230.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 658 | 937 | 1.6E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 524 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 242 | 266 | 17.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 658 | 939 | 36.795761 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 220 | 243 | 7.157505 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 664 | 689 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 787 | 799 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 7.53E-104 |
| RefSeq | XP_044446804.1 | leucine-rich repeat receptor-like kinase protein CLV1B [Triticum aestivum] | 8.09E-179 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 9.98E-74 | |
| TrEMBL | K3Y2M6 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 3.14E-228 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology