Basic Information
Locus ID:
AH06.2008
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 35343518 | 35346754 | + | AH06.2008 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 112,729.51 Da | 36.40 | 96.06 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 701 | 987 | 3.69445E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 298 | 357 | 1.0E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 81 | 139 | 1.2E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 698 | 985 | 6.1E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 71 | 9.4E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 509 | 569 | 1.1E-10 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 681 | 986 | 7.96E-71 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 379 | 599 | 1.67E-33 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 61 | 386 | 5.1E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 152 | 389 | 6.3E-59 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 667 | 788 | 5.1E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 151 | 5.7E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 390 | 630 | 2.0E-47 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 789 | 1002 | 3.8E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 344 | 368 | 61.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 320 | 343 | 290.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 101 | 125 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 249 | 273 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 531 | 555 | 13.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 695 | 992 | 1.6E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 200 | 224 | 160.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 273 | 296 | 190.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 556 | 579 | 86.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 249 | 270 | 310.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 507 | 533 | 61.0 | - |
| SMART | SM00369 | LRR_typ_2 | 556 | 580 | 11.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 126 | 152 | 160.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 695 | 986 | 37.106709 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 837 | 849 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 556 | 569 | 5.6E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 129 | 142 | 5.6E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1014 | 1033 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1011 | 1033 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 1.03E-109 |
| RefSeq | XP_039806376.1 | LRR receptor-like serine/threonine-protein kinase HSL2 [Panicum virgatum] | 0 |
| P47735 | Receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=RLK5 PE=1 SV=1 | 1.36E-72 | |
| TrEMBL | A0A3L6PFC2 | Receptor-like protein kinase 5 OS=Panicum miliaceum OX=4540 GN=C2845_PM10G14480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology