Basic Information
Locus ID:
AH06.1988
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 34940258 | 34948298 | + | AH06.1988 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 128,961.36 Da | 51.21 | 79.55 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16796 | Microtubule binding | 621 | 782 | 2.6E-46 | IPR031852 |
| Pfam | PF00225 | Kinesin motor domain | 794 | 892 | 1.4E-35 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 636 | 932 | 1.65E-91 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 15 | 124 | 1.07E-5 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 789 | 935 | 7.8E-46 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 12 | 132 | 1.4E-9 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 579 | 788 | 1.0E-56 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 634 | 902 | 3.7E-101 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 13 | 127 | 12.473116 | IPR001715 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 636 | 894 | 47.118065 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 847 | 868 | 7.9E-16 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 711 | 732 | 7.9E-16 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 999 | 1036 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1102 | 1118 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 156 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1079 | 1159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 940 | 982 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 158 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1135 | 1159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 951 | 970 | - | - |
| Coils | Coil | Coil | 503 | 541 | - | - |
| Coils | Coil | Coil | 160 | 180 | - | - |
| Coils | Coil | Coil | 443 | 477 | - | - |
| Coils | Coil | Coil | 908 | 935 | - | - |
| Coils | Coil | Coil | 377 | 397 | - | - |
| Coils | Coil | Coil | 616 | 636 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63640.2 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 8.28E-212 |
| RefSeq | XP_012701148.2 | kinesin-like protein KIN-14M isoform X1 [Setaria italica] | 0 |
| B9FTR1 | Kinesin-like protein KIN-14M OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14M PE=2 SV=2 | 0 | |
| TrEMBL | A0A368QVI6 | Calponin-homology (CH) domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_4G181400v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology