Basic Information
Locus ID:
AH06.1889
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function (DUF563)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| AH06 | 33152702 | 33154677 | + | AH06.1889 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.28 | 48,960.72 Da | 47.84 | 90.09 | 0.00 |
Protein Domain:
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18170.1 | Glycosyltransferase family 61 protein. | 1.26E-77 |
| RefSeq | XP_025813025.1 | uncharacterized protein LOC112890333 [Panicum hallii] | 1.15E-271 |
| Q5Z8T8 | Beta-1,2-xylosyltransferase XYXT1 OS=Oryza sativa subsp. japonica OX=39947 GN=XYXT1 PE=1 SV=1 | 6.62E-82 | |
| TrEMBL | A0A2T7DXW0 | Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_4G123900 PE=4 SV=1 | 2.61E-270 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 7 | AH06.1889, AH07.3701, BH06.1730, BH06.1741, BH07.3518 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0541950, gene-QOZ80_6BG0495140 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_10G155200, gene-BS78_K228100 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr10G015730, Chr11G006580, Chr11G006590 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-19343 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g32890 |