HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: AH06.1751
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
AH06 29572812 29577789 - AH06.1751
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
10.26 91,589.95 Da 66.40 72.62 -0.50
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 263 291 - -
MobiDBLite mobidb-lite consensus disorder prediction 111 171 - -
MobiDBLite mobidb-lite consensus disorder prediction 686 709 - -
MobiDBLite mobidb-lite consensus disorder prediction 140 158 - -
Coils Coil Coil 752 772 - -
Best hit
Source Best Hit ID Description E-value
TAIR AT1G52855.1 2.93E-10
RefSeq XP_039781338.1 uncharacterized protein LOC120648720 [Panicum virgatum] 5.58E-140
TrEMBL A0A8T0RG34 PIPK domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6KG367606 PE=4 SV=1 2.89E-56
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 16 AH01.2016, AH03.1812, AH04.1391, AH05.1654, AH05.1958 ...
AH06.133, AH06.1477, AH06.1751, AH07.1862, AH07.2887, AH08.1760, AH08.907, BH01.2065, BH01.3574, CH08.1750, CH09.2185
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.